| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120612292
Identifier: 120612292
GI number: 120612292
Start: 4020416
End: 4020862
Strand: Reverse
Name: 120612292
Synonym: Aave_3647
Alternate gene names: NA
Gene position: 4020862-4020416 (Counterclockwise)
Preceding gene: 120612293
Following gene: 120612290
Centisome position: 75.12
GC content: 72.04
Gene sequence:
>447_bases ATGGCGTCGGCCTGTCCCCTGTGCGGCGGCGACGGCGGCACGCTGGTCTGGCGCGGCCGGCAGATGCGCGTCGTGCATGC CGGCGAGGAGGCCGATCGCGGCTTCCCGGCGTTCTATCGCGTGATCTGGAACACGCACGTCGCGGAGTTCTCGGACCTGT CCGAAACCGAGCGCGCGCTCTGCATGGCCGCCGTGGCGGTGGTGGAGCAGGTGCTGCGCGAGCAGCTGCAGCCCACGAAG ATCAACCTGGCGGCCCTGGGCAACATGGTGCCGCACCTGCACTGGCACGTGATCGCCCGCTTCGGTTGGGACAGCCACTT TCCCGCGCCCGTCTGGGCTCCGTCCCAGCGCGATCGCGACCTCGAGCGGGAGGCTGCCGTGCAGGCCCGCGGCGAATCCA TCGCGCAGCAGCTGCGCGCGCGCCTGGCGCAGGCCGGCCTGGACTGA
Upstream 100 bases:
>100_bases ACATCGTCGTCGAGATGGCGCGCGAGATCCTGGGCGAGAACTGGATGCCCGAATACGTGCGGCGCGCCAACGCGGGCGGC ATCGAGCGGGTGCTGGTCTG
Downstream 100 bases:
>100_bases ATCCGCGCATACGCGCCGGAGCACCGGCCGGCCGTGTTCTCGGCGCGTTCAGTCCGCCGTCGTCACGCGGTTGCGGCCTG CTTCCTTGCTGGCATACAGC
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Protein; HIT Family Hydrolase; Diadenosine Tetraphosphate Hydrolase; Histidine Triad-Like; Histidine Triad Family Hydrolase; HIT Domain-Containing Protein; HIT Domain-Containing
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MASACPLCGGDGGTLVWRGRQMRVVHAGEEADRGFPAFYRVIWNTHVAEFSDLSETERALCMAAVAVVEQVLREQLQPTK INLAALGNMVPHLHWHVIARFGWDSHFPAPVWAPSQRDRDLEREAAVQARGESIAQQLRARLAQAGLD
Sequences:
>Translated_148_residues MASACPLCGGDGGTLVWRGRQMRVVHAGEEADRGFPAFYRVIWNTHVAEFSDLSETERALCMAAVAVVEQVLREQLQPTK INLAALGNMVPHLHWHVIARFGWDSHFPAPVWAPSQRDRDLEREAAVQARGESIAQQLRARLAQAGLD >Mature_147_residues ASACPLCGGDGGTLVWRGRQMRVVHAGEEADRGFPAFYRVIWNTHVAEFSDLSETERALCMAAVAVVEQVLREQLQPTKI NLAALGNMVPHLHWHVIARFGWDSHFPAPVWAPSQRDRDLEREAAVQARGESIAQQLRARLAQAGLD
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16423; Mature: 16292
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASACPLCGGDGGTLVWRGRQMRVVHAGEEADRGFPAFYRVIWNTHVAEFSDLSETERAL CCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CMAAVAVVEQVLREQLQPTKINLAALGNMVPHLHWHVIARFGWDSHFPAPVWAPSQRDRD HHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH LEREAAVQARGESIAQQLRARLAQAGLD HHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASACPLCGGDGGTLVWRGRQMRVVHAGEEADRGFPAFYRVIWNTHVAEFSDLSETERAL CCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CMAAVAVVEQVLREQLQPTKINLAALGNMVPHLHWHVIARFGWDSHFPAPVWAPSQRDRD HHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH LEREAAVQARGESIAQQLRARLAQAGLD HHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA