Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612274
Identifier: 120612274
GI number: 120612274
Start: 4001363
End: 4002235
Strand: Reverse
Name: 120612274
Synonym: Aave_3628
Alternate gene names: NA
Gene position: 4002235-4001363 (Counterclockwise)
Preceding gene: 120612275
Following gene: 120612273
Centisome position: 74.77
GC content: 74.23
Gene sequence:
>873_bases ATGGCGGCACCGGCGCTCCCTGCTGACCCTGTCCCCCGGCCGCTGCTGCTCGGCTGCGACTTCTCCAGCAGCCCCGGCCG GCGCAAGCCCATCGTGGTCGCGCTCGGCCACGAGCGCGGGGGCCGGGTGGCGCTGTCGGCGCTGGAGCGGTTCGAAACGC TGGAGTCCTTCGGCCGCTGGCTGGCAGCTCCCGGCGCCTGGGTGGGAGGCTTCGACCTGCCGTTCGGACTCCCGCGCGGC CTGCTGGAGACGTTGGGCTGGCCCATGGACTGGGCCGGCAGCATGGCCCACTACCGCAGCCTGACCCGGCCGCAGATCCG CGAGACGTTCGCTGCCTTCTGCGCCGCGCGGCCCGTGGGCGCGAAGTTCGCCCACCGCGCCACCGACGGGCCGGCCGGCT CCAGCACCTCCATGAAATGGGTGAACCCGCCCGTGGCCTACATGCTGCACGCGGGGCTGCCGCTGCTGATCGACGCGGGC GTGCACATTCCGGGGCTGCGGGCCGGTGATCCGGCGCGCGTGGCGCTGGAGGCCTATCCGGGCCTGCTGGCGCGCGAGAT CCTCGGGCGGCGCAGCTACAAGAGCGACGAGGTGGCGAAGCAGACCACCGAGCGCTTCATCGCCCGCAAGGACCTGGTCG CGGGCCTGGAAGCGGGCGCCACCCGCCTGGGCCTGCGGCTGGCGCTCACGCACGCGCAGCGGGACACGCTGGCCGGTGAC GCGAGCGGCGACAGCCTGGATGCCGTGCTGTGCCTCGTGCAGGCCGCGTGGGCGGCACAGCGCCATGCCCGGGGCGACGC GCTCTACGGGCTGCCTGCCGGCATGGATCCCCTGGAAGGCTGGATCGTGACCGCGCCGTTCCCCGATCGCTGA
Upstream 100 bases:
>100_bases CATCGGCGGCCACCTGCTCGGCGAAGGCGACCGCGCGGCCCGCCTGGCGGGCGCCGTGCTCATCGCGGCCGGCGTGGTGG CGCTGGCATTGGGTTAGTCC
Downstream 100 bases:
>100_bases CGGCCCACGGCAAATCCCTGCTTTGCGCCGGCTTCACACGGGGGCCGCACAATGCGGCCAGGATCGCCGCGGACATCGGC GACCAAAGGAGTTCCGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MAAPALPADPVPRPLLLGCDFSSSPGRRKPIVVALGHERGGRVALSALERFETLESFGRWLAAPGAWVGGFDLPFGLPRG LLETLGWPMDWAGSMAHYRSLTRPQIRETFAAFCAARPVGAKFAHRATDGPAGSSTSMKWVNPPVAYMLHAGLPLLIDAG VHIPGLRAGDPARVALEAYPGLLAREILGRRSYKSDEVAKQTTERFIARKDLVAGLEAGATRLGLRLALTHAQRDTLAGD ASGDSLDAVLCLVQAAWAAQRHARGDALYGLPAGMDPLEGWIVTAPFPDR
Sequences:
>Translated_290_residues MAAPALPADPVPRPLLLGCDFSSSPGRRKPIVVALGHERGGRVALSALERFETLESFGRWLAAPGAWVGGFDLPFGLPRG LLETLGWPMDWAGSMAHYRSLTRPQIRETFAAFCAARPVGAKFAHRATDGPAGSSTSMKWVNPPVAYMLHAGLPLLIDAG VHIPGLRAGDPARVALEAYPGLLAREILGRRSYKSDEVAKQTTERFIARKDLVAGLEAGATRLGLRLALTHAQRDTLAGD ASGDSLDAVLCLVQAAWAAQRHARGDALYGLPAGMDPLEGWIVTAPFPDR >Mature_289_residues AAPALPADPVPRPLLLGCDFSSSPGRRKPIVVALGHERGGRVALSALERFETLESFGRWLAAPGAWVGGFDLPFGLPRGL LETLGWPMDWAGSMAHYRSLTRPQIRETFAAFCAARPVGAKFAHRATDGPAGSSTSMKWVNPPVAYMLHAGLPLLIDAGV HIPGLRAGDPARVALEAYPGLLAREILGRRSYKSDEVAKQTTERFIARKDLVAGLEAGATRLGLRLALTHAQRDTLAGDA SGDSLDAVLCLVQAAWAAQRHARGDALYGLPAGMDPLEGWIVTAPFPDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30909; Mature: 30778
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPALPADPVPRPLLLGCDFSSSPGRRKPIVVALGHERGGRVALSALERFETLESFGRW CCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH LAAPGAWVGGFDLPFGLPRGLLETLGWPMDWAGSMAHYRSLTRPQIRETFAAFCAARPVG HCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC AKFAHRATDGPAGSSTSMKWVNPPVAYMLHAGLPLLIDAGVHIPGLRAGDPARVALEAYP HHHHHHCCCCCCCCCCCCEECCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEHHHHC GLLAREILGRRSYKSDEVAKQTTERFIARKDLVAGLEAGATRLGLRLALTHAQRDTLAGD CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC ASGDSLDAVLCLVQAAWAAQRHARGDALYGLPAGMDPLEGWIVTAPFPDR CCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure AAPALPADPVPRPLLLGCDFSSSPGRRKPIVVALGHERGGRVALSALERFETLESFGRW CCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH LAAPGAWVGGFDLPFGLPRGLLETLGWPMDWAGSMAHYRSLTRPQIRETFAAFCAARPVG HCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC AKFAHRATDGPAGSSTSMKWVNPPVAYMLHAGLPLLIDAGVHIPGLRAGDPARVALEAYP HHHHHHCCCCCCCCCCCCEECCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEHHHHC GLLAREILGRRSYKSDEVAKQTTERFIARKDLVAGLEAGATRLGLRLALTHAQRDTLAGD CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC ASGDSLDAVLCLVQAAWAAQRHARGDALYGLPAGMDPLEGWIVTAPFPDR CCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA