Click here to switch to the map view.

The map label for this gene is 120612254

Identifier: 120612254

GI number: 120612254

Start: 3980323

End: 3982077

Strand: Direct

Name: 120612254

Synonym: Aave_3607

Alternate gene names: NA

Gene position: 3980323-3982077 (Clockwise)

Preceding gene: 120612250

Following gene: 120612255

Centisome position: 74.36

GC content: 69.4

Gene sequence:

>1755_bases
TTGCTGTGCGCACTGTATGCCGTGGCGGCGCCCTCTTTCGCGGCCCCGGCTGCTCCCCCGCCCCCCTCCGCGCGAACCCA
GCAGACGGAACTGCAGGTGGAGAACATCCCCAACAGCGAAGCGCGCGCAGCCCTGGATGCCGAACTGTTCTACGACATCC
TCGTCGGCGAACTGAGCACCAGCCAGGGAGACCCCGGCACCGGCTATGCCCTCATGCTCGAAGCGGCCCGGCGCAGCGGC
GACGCCCAGCTCTACCGGCGCGCGACGGACATCGCGCTGCAGTCGCGCTCCGGCGAATACGCCCTGGCGGCAGCGCGTGC
CTGGAAGGAAGCCCAGCCGCAATCGCGCGAGGCCAATCGCTACGTGCTGCAGATCCTCATCGCGCTCAACCGCATCCACG
AGACGGGCGACCTGCTGCGGCAGGAACTGGCGCAGTCTCCGCCGAAGGACCGGCTGCTGTCACTCCAGGCCATTCCGCAA
CTGTACGGACGCGCATCTGACAAGGCAGCCGCGGCCGCCATCGTCGAGAAGGCCCTGGCGGACCAGTTGCAGAACCCGGC
GACCGGGCCGCTCGCCTGGACGGCGCTGGGGCGGATGCGGCTCGCTGCCGGCGACCGCAAGGGCGCGCTCGAGGCCGCCC
GCAACGCCCTGGCGCAGGAGCCCACGCTGGACGCGGCGGCCCTGCTCTCGCTGCAGCTCGTCGAGGCGGGAGAAGCCGAC
GCCGAGCCGCTGGTGGCCCGGTACATGGGCGGCAAGCCCCAGCCGGAGATCCGCATGGCCTACGCGGGGGTCCTCCTCAA
CCTGCAGCGCTATTCGGAGGCCGGGACGCAGCTGGACCTGCTCACGCGGGAAGCCCCGGACATGGCCGAGGCCTGGCTGC
TGAAAGCGACCCTGGCCCTGCAATCCGACCGCCTGCAGGAATCCGAATCGGCGCTGGAACAGTTCGAACGCCTGCTGCAG
TCCTATCCGCCCACGGACCCGCGCAAGGCCGCCATGGGCCAGGCCTACCTGCTGCGCTCGCAGATCGCCGAAAAGCGCGG
CGACCTCGCCCAGGCGGAAGCCTGGCTCGGAAAAATCGAGAATTCATCCGAACTCCTGGCCGCTCAGACGCGGCGCGCTT
CGCTGCTGGCGCGGCAGGGCAAACTGAACGAAGGCATCGCGCTGATCCGCCGCCTGCCGGCCCGAAACCCGGTGGAAGAA
CGCCAGAAGCTCGTGGCCGAGGCGCAACTGCTGCGCGACGCCAAGCAGTACCAGCAGGCGTTCGAGGTGCAGGGCAAGGC
CGTGGCGATGGCGCCGGGCGATTACGACCTGGCATACGACCAGGCCATGCTGGCCGAGAAGGCCGGCGACCTGGCCGGCA
TGGAGCGGCTGCTGCGCCAGATCATCGAAAAGCGCCCCGACTACCACCACGCCTACAACGCGCTCGGTTATTCGCTGGCC
GAGCGTGGCATCCGCCTCCAGGAAGCCCGGCAACTGATCCAGAAGGCCCTGACCTACGCGCCCAGGGATCCGTTCATCAC
CGACAGCCTGGGCTGGGTGGAGTTCCGCCTGGGCAATCACGCCGAGGCCGCGCGGCTGTTGAACGAAGCCTTCCAGCGCC
AGCCCGACCCCGAGATCGCGGCCCACCTGGGCGAGGTGCTGTGGACCATGGGCGAGCGCTCCAGGGCCCTGCAGGTCTGG
CGCACCGGACTGCAGCTGAACAAGGACAACGAAACGCTGCAGGAAACCATCAAGCGGCTGAAGGCCGCCCCGTGA

Upstream 100 bases:

>100_bases
ACCTCGGGCAACTCAGGCATATGGTCGGGCTCCGCAAACAGTATCTGGCATGGATTATTATGAGTCGATGGAGCAATCAC
ATCGACTTCGGAGTGCCGCT

Downstream 100 bases:

>100_bases
GGGTGGCGTCCTTGCCCGCGGTGCCACTGCGCCGCAGTCTGATCGGAGTCGTGGCAGGATTCGCGCTGGTGCTGGCCGGA
TGCGCCACCCCGCCCCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:

>584_residues
MLCALYAVAAPSFAAPAAPPPPSARTQQTELQVENIPNSEARAALDAELFYDILVGELSTSQGDPGTGYALMLEAARRSG
DAQLYRRATDIALQSRSGEYALAAARAWKEAQPQSREANRYVLQILIALNRIHETGDLLRQELAQSPPKDRLLSLQAIPQ
LYGRASDKAAAAAIVEKALADQLQNPATGPLAWTALGRMRLAAGDRKGALEAARNALAQEPTLDAAALLSLQLVEAGEAD
AEPLVARYMGGKPQPEIRMAYAGVLLNLQRYSEAGTQLDLLTREAPDMAEAWLLKATLALQSDRLQESESALEQFERLLQ
SYPPTDPRKAAMGQAYLLRSQIAEKRGDLAQAEAWLGKIENSSELLAAQTRRASLLARQGKLNEGIALIRRLPARNPVEE
RQKLVAEAQLLRDAKQYQQAFEVQGKAVAMAPGDYDLAYDQAMLAEKAGDLAGMERLLRQIIEKRPDYHHAYNALGYSLA
ERGIRLQEARQLIQKALTYAPRDPFITDSLGWVEFRLGNHAEAARLLNEAFQRQPDPEIAAHLGEVLWTMGERSRALQVW
RTGLQLNKDNETLQETIKRLKAAP

Sequences:

>Translated_584_residues
MLCALYAVAAPSFAAPAAPPPPSARTQQTELQVENIPNSEARAALDAELFYDILVGELSTSQGDPGTGYALMLEAARRSG
DAQLYRRATDIALQSRSGEYALAAARAWKEAQPQSREANRYVLQILIALNRIHETGDLLRQELAQSPPKDRLLSLQAIPQ
LYGRASDKAAAAAIVEKALADQLQNPATGPLAWTALGRMRLAAGDRKGALEAARNALAQEPTLDAAALLSLQLVEAGEAD
AEPLVARYMGGKPQPEIRMAYAGVLLNLQRYSEAGTQLDLLTREAPDMAEAWLLKATLALQSDRLQESESALEQFERLLQ
SYPPTDPRKAAMGQAYLLRSQIAEKRGDLAQAEAWLGKIENSSELLAAQTRRASLLARQGKLNEGIALIRRLPARNPVEE
RQKLVAEAQLLRDAKQYQQAFEVQGKAVAMAPGDYDLAYDQAMLAEKAGDLAGMERLLRQIIEKRPDYHHAYNALGYSLA
ERGIRLQEARQLIQKALTYAPRDPFITDSLGWVEFRLGNHAEAARLLNEAFQRQPDPEIAAHLGEVLWTMGERSRALQVW
RTGLQLNKDNETLQETIKRLKAAP
>Mature_584_residues
MLCALYAVAAPSFAAPAAPPPPSARTQQTELQVENIPNSEARAALDAELFYDILVGELSTSQGDPGTGYALMLEAARRSG
DAQLYRRATDIALQSRSGEYALAAARAWKEAQPQSREANRYVLQILIALNRIHETGDLLRQELAQSPPKDRLLSLQAIPQ
LYGRASDKAAAAAIVEKALADQLQNPATGPLAWTALGRMRLAAGDRKGALEAARNALAQEPTLDAAALLSLQLVEAGEAD
AEPLVARYMGGKPQPEIRMAYAGVLLNLQRYSEAGTQLDLLTREAPDMAEAWLLKATLALQSDRLQESESALEQFERLLQ
SYPPTDPRKAAMGQAYLLRSQIAEKRGDLAQAEAWLGKIENSSELLAAQTRRASLLARQGKLNEGIALIRRLPARNPVEE
RQKLVAEAQLLRDAKQYQQAFEVQGKAVAMAPGDYDLAYDQAMLAEKAGDLAGMERLLRQIIEKRPDYHHAYNALGYSLA
ERGIRLQEARQLIQKALTYAPRDPFITDSLGWVEFRLGNHAEAARLLNEAFQRQPDPEIAAHLGEVLWTMGERSRALQVW
RTGLQLNKDNETLQETIKRLKAAP

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 64224; Mature: 64224

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCALYAVAAPSFAAPAAPPPPSARTQQTELQVENIPNSEARAALDAELFYDILVGELST
CCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
SQGDPGTGYALMLEAARRSGDAQLYRRATDIALQSRSGEYALAAARAWKEAQPQSREANR
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHH
YVLQILIALNRIHETGDLLRQELAQSPPKDRLLSLQAIPQLYGRASDKAAAAAIVEKALA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
DQLQNPATGPLAWTALGRMRLAAGDRKGALEAARNALAQEPTLDAAALLSLQLVEAGEAD
HHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
AEPLVARYMGGKPQPEIRMAYAGVLLNLQRYSEAGTQLDLLTREAPDMAEAWLLKATLAL
CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCCHHHHHHHHHHHHHH
QSDRLQESESALEQFERLLQSYPPTDPRKAAMGQAYLLRSQIAEKRGDLAQAEAWLGKIE
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
NSSELLAAQTRRASLLARQGKLNEGIALIRRLPARNPVEERQKLVAEAQLLRDAKQYQQA
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FEVQGKAVAMAPGDYDLAYDQAMLAEKAGDLAGMERLLRQIIEKRPDYHHAYNALGYSLA
HHCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ERGIRLQEARQLIQKALTYAPRDPFITDSLGWVEFRLGNHAEAARLLNEAFQRQPDPEIA
HHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHH
AHLGEVLWTMGERSRALQVWRTGLQLNKDNETLQETIKRLKAAP
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MLCALYAVAAPSFAAPAAPPPPSARTQQTELQVENIPNSEARAALDAELFYDILVGELST
CCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
SQGDPGTGYALMLEAARRSGDAQLYRRATDIALQSRSGEYALAAARAWKEAQPQSREANR
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHH
YVLQILIALNRIHETGDLLRQELAQSPPKDRLLSLQAIPQLYGRASDKAAAAAIVEKALA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
DQLQNPATGPLAWTALGRMRLAAGDRKGALEAARNALAQEPTLDAAALLSLQLVEAGEAD
HHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
AEPLVARYMGGKPQPEIRMAYAGVLLNLQRYSEAGTQLDLLTREAPDMAEAWLLKATLAL
CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCCHHHHHHHHHHHHHH
QSDRLQESESALEQFERLLQSYPPTDPRKAAMGQAYLLRSQIAEKRGDLAQAEAWLGKIE
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
NSSELLAAQTRRASLLARQGKLNEGIALIRRLPARNPVEERQKLVAEAQLLRDAKQYQQA
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FEVQGKAVAMAPGDYDLAYDQAMLAEKAGDLAGMERLLRQIIEKRPDYHHAYNALGYSLA
HHCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ERGIRLQEARQLIQKALTYAPRDPFITDSLGWVEFRLGNHAEAARLLNEAFQRQPDPEIA
HHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHH
AHLGEVLWTMGERSRALQVWRTGLQLNKDNETLQETIKRLKAAP
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883699; 10984043 [H]