Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120612208
Identifier: 120612208
GI number: 120612208
Start: 3934119
End: 3934313
Strand: Reverse
Name: 120612208
Synonym: Aave_3561
Alternate gene names: NA
Gene position: 3934313-3934119 (Counterclockwise)
Preceding gene: 120612209
Following gene: 120612207
Centisome position: 73.5
GC content: 65.64
Gene sequence:
>195_bases ATGGCGGACGACAAGACCAAGGTGGGTGGCGCGGACCGGCGGCTCATCAATCTCTCGGAAGACTACGAAGTGCGCGACTG GGCCTCGGTGCTCAATTGCGACGAATACGAACTGCGCAGGGCCGTGCAGGCGGTGGGCAATTCGGCGGAGGCCGTGCGCA GCTACCTCGCGCAGAACCGCGAGCGCGCGCAATGA
Upstream 100 bases:
>100_bases GACAGTTCCGCCATGGCGGGCCGGGCTTGTCCTACGTCCGGGCCGCGGTGGGCCGCCCAGCATGGATGCATCGCACTTGT ATTGCAGAGGAGTTCTTTCC
Downstream 100 bases:
>100_bases CGCCCAAAGCACCGGAGCACACCATGAAGCCTGACGACGACACCTCCACCCAATCCCTGCCCGACACGTCCCGCGACGCC ATCGCGGTTGCCGAGCAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MADDKTKVGGADRRLINLSEDYEVRDWASVLNCDEYELRRAVQAVGNSAEAVRSYLAQNRERAQ
Sequences:
>Translated_64_residues MADDKTKVGGADRRLINLSEDYEVRDWASVLNCDEYELRRAVQAVGNSAEAVRSYLAQNRERAQ >Mature_63_residues ADDKTKVGGADRRLINLSEDYEVRDWASVLNCDEYELRRAVQAVGNSAEAVRSYLAQNRERAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7274; Mature: 7143
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDKTKVGGADRRLINLSEDYEVRDWASVLNCDEYELRRAVQAVGNSAEAVRSYLAQNR CCCCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH ERAQ HCCC >Mature Secondary Structure ADDKTKVGGADRRLINLSEDYEVRDWASVLNCDEYELRRAVQAVGNSAEAVRSYLAQNR CCCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH ERAQ HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA