Click here to switch to the map view.

The map label for this gene is 120612206

Identifier: 120612206

GI number: 120612206

Start: 3932801

End: 3933670

Strand: Reverse

Name: 120612206

Synonym: Aave_3559

Alternate gene names: NA

Gene position: 3933670-3932801 (Counterclockwise)

Preceding gene: 120612207

Following gene: 120612205

Centisome position: 73.49

GC content: 71.84

Gene sequence:

>870_bases
ATGCCTGCCCGAGCGATGCATCAAGACACCTTGCACGGCGGCAACCTGCGCCCGCTGGCCTGGGCCGGCGGATGCATCGG
GTTCAGCCTGGGCGGGTTCTTCGACGGCATCCTGCTGCACCAGATCCTGCAGTGGCACCACCTGCTGAGCCGCGTGCGCT
CGCCCGTGCTGGAGAACATCCGCCTGCAGATCCTGGCGGACGGATTGTTCCACGCGCTGATGTACGTCATCGCCGCCGTG
GGAATCTGGAAGCTTTGGAAGTCGCGCGCCCTGTGCGCCCTGCCACGGGCGGACCGCACGTTGTGGGGGCATGCGCTGAT
GGGCTTCGGCCTGTGGCACCTGCTGGATGCCGTGCTGTCCCACTGGGTGCTCGGCCTGCACCGCGTGCGCGATGCCGCCG
AGATCCCGCTGCTGTGGGATGTGGGGTGGCTTGCCGTGTTCGGGCTGCTGCCTTTGTGGTTCGGCTGGCGCGCACGTCGC
GGGCCCCCTGCAGGGCAGGGGGGCGCGGATGTTCCCCGTCCGCAGGACGGCAGCGTGCCCGCGCGGAGTCCCGGCACGCC
GGGCCGGTGGCTGTCCGCCGTGCTGATCGTGACCGGTGCCGCGCTCGCCTCCGTGTGGCCGCAGGCCGGACGCGGCGGCG
ATGTGATGGTGCTGTTCGGACCCGGCGTCCCCGCTGCGGCGGCCATGGAGCGGTTGTCCGCAGTCGATGCCCGCGTCATG
TGGGCGGACCGTTCCGGTGCCCTGTGGGCCGTGCGGCTCGAAGACCCTGCGGCGGCCCGCCGGCTGTACGGGCAGGGCGC
GTGGCTGGTAGGCGACTCGCGCCTGCGCTGGGGGTGCCTGTCCTGGATGGGTGCCGGTCCGTCCACGTGA

Upstream 100 bases:

>100_bases
ACTACGGCGGCGACGAGCCCGACGGCCCCATGCCCTCGTCCCGTCAGGGCGCGGGCCTGATCGGCGAGACGCGCGACCGC
AGCCGCCAGCACTGACCGGC

Downstream 100 bases:

>100_bases
CGGCCGGCTGGAAAAAAGTTTCGCCGGTGCGCAGGGGTGCCGAAGGGGGCCCGACCTGCCGCGCCATTGACTCGCTGCCA
TGCGGCCGCTGCCGCTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MPARAMHQDTLHGGNLRPLAWAGGCIGFSLGGFFDGILLHQILQWHHLLSRVRSPVLENIRLQILADGLFHALMYVIAAV
GIWKLWKSRALCALPRADRTLWGHALMGFGLWHLLDAVLSHWVLGLHRVRDAAEIPLLWDVGWLAVFGLLPLWFGWRARR
GPPAGQGGADVPRPQDGSVPARSPGTPGRWLSAVLIVTGAALASVWPQAGRGGDVMVLFGPGVPAAAAMERLSAVDARVM
WADRSGALWAVRLEDPAAARRLYGQGAWLVGDSRLRWGCLSWMGAGPST

Sequences:

>Translated_289_residues
MPARAMHQDTLHGGNLRPLAWAGGCIGFSLGGFFDGILLHQILQWHHLLSRVRSPVLENIRLQILADGLFHALMYVIAAV
GIWKLWKSRALCALPRADRTLWGHALMGFGLWHLLDAVLSHWVLGLHRVRDAAEIPLLWDVGWLAVFGLLPLWFGWRARR
GPPAGQGGADVPRPQDGSVPARSPGTPGRWLSAVLIVTGAALASVWPQAGRGGDVMVLFGPGVPAAAAMERLSAVDARVM
WADRSGALWAVRLEDPAAARRLYGQGAWLVGDSRLRWGCLSWMGAGPST
>Mature_288_residues
PARAMHQDTLHGGNLRPLAWAGGCIGFSLGGFFDGILLHQILQWHHLLSRVRSPVLENIRLQILADGLFHALMYVIAAVG
IWKLWKSRALCALPRADRTLWGHALMGFGLWHLLDAVLSHWVLGLHRVRDAAEIPLLWDVGWLAVFGLLPLWFGWRARRG
PPAGQGGADVPRPQDGSVPARSPGTPGRWLSAVLIVTGAALASVWPQAGRGGDVMVLFGPGVPAAAAMERLSAVDARVMW
ADRSGALWAVRLEDPAAARRLYGQGAWLVGDSRLRWGCLSWMGAGPST

Specific function: Unknown

COG id: COG4329

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31355; Mature: 31224

Theoretical pI: Translated: 11.33; Mature: 11.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPARAMHQDTLHGGNLRPLAWAGGCIGFSLGGFFDGILLHQILQWHHLLSRVRSPVLENI
CCCCHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQILADGLFHALMYVIAAVGIWKLWKSRALCALPRADRTLWGHALMGFGLWHLLDAVLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHH
HWVLGLHRVRDAAEIPLLWDVGWLAVFGLLPLWFGWRARRGPPAGQGGADVPRPQDGSVP
HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
ARSPGTPGRWLSAVLIVTGAALASVWPQAGRGGDVMVLFGPGVPAAAAMERLSAVDARVM
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEE
WADRSGALWAVRLEDPAAARRLYGQGAWLVGDSRLRWGCLSWMGAGPST
EECCCCCEEEEEECCHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PARAMHQDTLHGGNLRPLAWAGGCIGFSLGGFFDGILLHQILQWHHLLSRVRSPVLENI
CCCHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQILADGLFHALMYVIAAVGIWKLWKSRALCALPRADRTLWGHALMGFGLWHLLDAVLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHH
HWVLGLHRVRDAAEIPLLWDVGWLAVFGLLPLWFGWRARRGPPAGQGGADVPRPQDGSVP
HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
ARSPGTPGRWLSAVLIVTGAALASVWPQAGRGGDVMVLFGPGVPAAAAMERLSAVDARVM
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEE
WADRSGALWAVRLEDPAAARRLYGQGAWLVGDSRLRWGCLSWMGAGPST
EECCCCCEEEEEECCHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA