Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612131
Identifier: 120612131
GI number: 120612131
Start: 3840649
End: 3841281
Strand: Reverse
Name: 120612131
Synonym: Aave_3480
Alternate gene names: NA
Gene position: 3841281-3840649 (Counterclockwise)
Preceding gene: 120612132
Following gene: 120612130
Centisome position: 71.76
GC content: 39.18
Gene sequence:
>633_bases ATGAATAAAGCTATTGGTTATGTGGCTGATTTATGGCATCGAGAGCCTCCCGCAGATGAGCGGGCGATAGCTCGTGTTGA ATCGGAGCTAGATGTTGTTTTTCCCGTGGATTATAGGGAATTTTTACTTTGGTCTAATGGAGGGCAGGCTCAAGTCGGAA GTGCATACTTTTCATTTTGGCGTGTGTGGGATATTGTTGATAGAAATATCTCTGCATCTATTAAAAAGTATATGTCTCCC CTTTTTGTCGGTATCGGGACCAATGGTGGAGGGGAGTGCTATGCCTTGGATTATTCGGATGATATTTCTTCGCCGAATTT TGTCATAGTTCCGCTAGGGGATTTGGACCATGCTAGTAAGTTTGTTATTGCATCTTCGTTGGCTGGAGTTTTTGAAAAAT CTTTGAATGGGGATTTTAGCGATGCTGATTATAATGACAATGAAATTGGGCCGTTAACGGAGGAAATGTTGAATATAAGG AGGAAAAATATTATGTATGAGGCTGAAAATTATTGGCAGAAAAAAGAATATTCAAAATTCATAGCATTGCTGAGCAAATC GGAGCTTGATTTGACCGATTTGATGCGTAAAAAAATAGATATGGCGAAAAAGAAGATCAAACAGAATAACTAA
Upstream 100 bases:
>100_bases TTCGACAATGCGTCGAGAGATTTGAGGGCTGCAGGCGTTTCAGAGAGATGCAGAAAACGGGCCCTTAAAAAGGCTTATCA ATATTTCTATAACCGTACAG
Downstream 100 bases:
>100_bases AAAATCTCTGCACGGGTCAAAACGAGCCGTCATAAATCATTGATGCTGTCGCTGTTAGGACTCCAGAGTTTCCATGTAGG AGTGGCTAACAAAACCTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MNKAIGYVADLWHREPPADERAIARVESELDVVFPVDYREFLLWSNGGQAQVGSAYFSFWRVWDIVDRNISASIKKYMSP LFVGIGTNGGGECYALDYSDDISSPNFVIVPLGDLDHASKFVIASSLAGVFEKSLNGDFSDADYNDNEIGPLTEEMLNIR RKNIMYEAENYWQKKEYSKFIALLSKSELDLTDLMRKKIDMAKKKIKQNN
Sequences:
>Translated_210_residues MNKAIGYVADLWHREPPADERAIARVESELDVVFPVDYREFLLWSNGGQAQVGSAYFSFWRVWDIVDRNISASIKKYMSP LFVGIGTNGGGECYALDYSDDISSPNFVIVPLGDLDHASKFVIASSLAGVFEKSLNGDFSDADYNDNEIGPLTEEMLNIR RKNIMYEAENYWQKKEYSKFIALLSKSELDLTDLMRKKIDMAKKKIKQNN >Mature_210_residues MNKAIGYVADLWHREPPADERAIARVESELDVVFPVDYREFLLWSNGGQAQVGSAYFSFWRVWDIVDRNISASIKKYMSP LFVGIGTNGGGECYALDYSDDISSPNFVIVPLGDLDHASKFVIASSLAGVFEKSLNGDFSDADYNDNEIGPLTEEMLNIR RKNIMYEAENYWQKKEYSKFIALLSKSELDLTDLMRKKIDMAKKKIKQNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23888; Mature: 23888
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKAIGYVADLWHREPPADERAIARVESELDVVFPVDYREFLLWSNGGQAQVGSAYFSFW CCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEECCCHHHEEEECCCCCCHHHHHHHHHH RVWDIVDRNISASIKKYMSPLFVGIGTNGGGECYALDYSDDISSPNFVIVPLGDLDHASK HHHHHHCCCHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCCHHH FVIASSLAGVFEKSLNGDFSDADYNDNEIGPLTEEMLNIRRKNIMYEAENYWQKKEYSKF HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH IALLSKSELDLTDLMRKKIDMAKKKIKQNN HHHHHCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKAIGYVADLWHREPPADERAIARVESELDVVFPVDYREFLLWSNGGQAQVGSAYFSFW CCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEECCCHHHEEEECCCCCCHHHHHHHHHH RVWDIVDRNISASIKKYMSPLFVGIGTNGGGECYALDYSDDISSPNFVIVPLGDLDHASK HHHHHHCCCHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCCHHH FVIASSLAGVFEKSLNGDFSDADYNDNEIGPLTEEMLNIRRKNIMYEAENYWQKKEYSKF HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH IALLSKSELDLTDLMRKKIDMAKKKIKQNN HHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA