Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612124
Identifier: 120612124
GI number: 120612124
Start: 3834393
End: 3835049
Strand: Reverse
Name: 120612124
Synonym: Aave_3471
Alternate gene names: NA
Gene position: 3835049-3834393 (Counterclockwise)
Preceding gene: 120612125
Following gene: 120612123
Centisome position: 71.65
GC content: 55.25
Gene sequence:
>657_bases ATGGGTGATGCGGTTTGCAATGTGTCGAATGGCTCTCCAGGGTGGGGAGTCATCGACCTTTTCGCTTGGAAACTCGTGCC GGCGCGATGGGGCGGGGGTCGGGCTTACATCCAGAAGTTCAAGGACGCCTGGGTCCGGCATAACAAGCAGTTGATCGTCA ACGAGTCAAAGAAGTACCAATTGCCGCCGGAGTTGCTGGCGGGCGTTTGCTGGATCGAAGTGGGTGGCGATCCCAGCTTC ATCGATCGGGTCGCTTTCGAGATCAGGTCGTTCGACTGGAGCGGTCCTCCTTGGACAGACAAGCAGGCGATTACCAACCA TCCCAACAAGACGTCCTTTGGAGCCGTCAGCATTCAGATTCGCGCTGCGGCTGAAACGCTCGGGCTCAATCCCTCTGAAC TGACTTCCAGCCAAGCCCGCGGATTGGCAGAATGCTTGCAGAAAGATGTGTTCAACATCGAAGTGGTCGCCAGGCATTTG AGCCAATTGGCTGCACACGATGGTTTCTCCGCACCCCTCGGTCAAGAAGAGGTTCGCATCATTGGTGCTAGATACAACCG GGGAGTGGGATTGACGCTGGAGCAGATCAGGAAGAACACCAGCTATGGCAATTTCCTCGTGAAATTCTGGAACCGTTTCA GTCAACTGATCCAGTAA
Upstream 100 bases:
>100_bases AAAAGAGAACGCTCATCTGTAGAAGCGCCCTGCCAGAATTCGACCTTTCCCAACGGTTGACCGCCGGATAATTCTTGAAA AGACGAGGAGGGACGAGCGC
Downstream 100 bases:
>100_bases GCCATGCACAAAACCCTCCGTCTCTGCATCCACCTGGCATGCATCGCCGGCCTGCTGGCGATGTTCCTGCTGTCCGGCGA CAAGTACGACGTGCTGTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MGDAVCNVSNGSPGWGVIDLFAWKLVPARWGGGRAYIQKFKDAWVRHNKQLIVNESKKYQLPPELLAGVCWIEVGGDPSF IDRVAFEIRSFDWSGPPWTDKQAITNHPNKTSFGAVSIQIRAAAETLGLNPSELTSSQARGLAECLQKDVFNIEVVARHL SQLAAHDGFSAPLGQEEVRIIGARYNRGVGLTLEQIRKNTSYGNFLVKFWNRFSQLIQ
Sequences:
>Translated_218_residues MGDAVCNVSNGSPGWGVIDLFAWKLVPARWGGGRAYIQKFKDAWVRHNKQLIVNESKKYQLPPELLAGVCWIEVGGDPSF IDRVAFEIRSFDWSGPPWTDKQAITNHPNKTSFGAVSIQIRAAAETLGLNPSELTSSQARGLAECLQKDVFNIEVVARHL SQLAAHDGFSAPLGQEEVRIIGARYNRGVGLTLEQIRKNTSYGNFLVKFWNRFSQLIQ >Mature_217_residues GDAVCNVSNGSPGWGVIDLFAWKLVPARWGGGRAYIQKFKDAWVRHNKQLIVNESKKYQLPPELLAGVCWIEVGGDPSFI DRVAFEIRSFDWSGPPWTDKQAITNHPNKTSFGAVSIQIRAAAETLGLNPSELTSSQARGLAECLQKDVFNIEVVARHLS QLAAHDGFSAPLGQEEVRIIGARYNRGVGLTLEQIRKNTSYGNFLVKFWNRFSQLIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24256; Mature: 24125
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDAVCNVSNGSPGWGVIDLFAWKLVPARWGGGRAYIQKFKDAWVRHNKQLIVNESKKYQ CCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCC LPPELLAGVCWIEVGGDPSFIDRVAFEIRSFDWSGPPWTDKQAITNHPNKTSFGAVSIQI CCHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCEEEEEE RAAAETLGLNPSELTSSQARGLAECLQKDVFNIEVVARHLSQLAAHDGFSAPLGQEEVRI EEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE IGARYNRGVGLTLEQIRKNTSYGNFLVKFWNRFSQLIQ EECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure GDAVCNVSNGSPGWGVIDLFAWKLVPARWGGGRAYIQKFKDAWVRHNKQLIVNESKKYQ CCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCC LPPELLAGVCWIEVGGDPSFIDRVAFEIRSFDWSGPPWTDKQAITNHPNKTSFGAVSIQI CCHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCEEEEEE RAAAETLGLNPSELTSSQARGLAECLQKDVFNIEVVARHLSQLAAHDGFSAPLGQEEVRI EEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE IGARYNRGVGLTLEQIRKNTSYGNFLVKFWNRFSQLIQ EECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA