Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612089
Identifier: 120612089
GI number: 120612089
Start: 3795070
End: 3795630
Strand: Direct
Name: 120612089
Synonym: Aave_3436
Alternate gene names: NA
Gene position: 3795070-3795630 (Clockwise)
Preceding gene: 120612088
Following gene: 120612091
Centisome position: 70.9
GC content: 70.94
Gene sequence:
>561_bases ATGACGGACCATCCGCTGCAAGGCATGTTCGGGGAAAAGTCCCTGACCAAGATCGCTGGAATCTACGATGACAAACCACC GGCCGAGGCGCTCGCCGGCCGCCTGCTGCGGCTGCATGGCCTGCGGCCGGGGCAGGTACGGCTGCTGGGCCCGCAGGACG CACGCGCTTCGCGGGCGGACCTGTTCGGCCGCGCCCTGGAACCGGAACAGCGAGGCGTTTTCCGCACGCTGCCGCGATCG CATCTCGTGACCGGGCTGGCGGGCGCCCTGGCGGGCGTGCTGTTCTACGCCTGGCTGCTGCGCGGCAGCCAGCCCGTGGT GGCGGACAGTCCGCTGCAGGCCTTCCTCGCCATCGTCGGCATCGCCACGGCCTTCGGTGTGCTGCTCGGCGGGCTGGTCT CGCTGCGGCCGGACCACCTGCGGCTGATCACCCAGGTCCGTTCCGCGCTGCGCGACGGGCATTGGGCCGTGGTGGTCCAT CCCACGGACCCGCACCAGGCGCAGCTGGCCAGGGACCTGCTGGACGGCAGCCACCCCGGAAAGATCGTAACGGCGCTCTG A
Upstream 100 bases:
>100_bases CGTCAGAAACCGGCCTGCGTCCGCCCGCGGCGCACGCCCGTCGCGGGCAGCGGCAGGCGTCCTACAGGCCGGCAGTCCAT GCCTGCCTAACGTTGGGTCC
Downstream 100 bases:
>100_bases TCCGCCGGCTCACCGCGCTGGCCGCATGGCCGTATCGGCCAAAGCGTCAGGACAGCAGCAACTGCAGCACGGCCGGTGCG TAGATCGCATGCTCCTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTDHPLQGMFGEKSLTKIAGIYDDKPPAEALAGRLLRLHGLRPGQVRLLGPQDARASRADLFGRALEPEQRGVFRTLPRS HLVTGLAGALAGVLFYAWLLRGSQPVVADSPLQAFLAIVGIATAFGVLLGGLVSLRPDHLRLITQVRSALRDGHWAVVVH PTDPHQAQLARDLLDGSHPGKIVTAL
Sequences:
>Translated_186_residues MTDHPLQGMFGEKSLTKIAGIYDDKPPAEALAGRLLRLHGLRPGQVRLLGPQDARASRADLFGRALEPEQRGVFRTLPRS HLVTGLAGALAGVLFYAWLLRGSQPVVADSPLQAFLAIVGIATAFGVLLGGLVSLRPDHLRLITQVRSALRDGHWAVVVH PTDPHQAQLARDLLDGSHPGKIVTAL >Mature_185_residues TDHPLQGMFGEKSLTKIAGIYDDKPPAEALAGRLLRLHGLRPGQVRLLGPQDARASRADLFGRALEPEQRGVFRTLPRSH LVTGLAGALAGVLFYAWLLRGSQPVVADSPLQAFLAIVGIATAFGVLLGGLVSLRPDHLRLITQVRSALRDGHWAVVVHP TDPHQAQLARDLLDGSHPGKIVTAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19955; Mature: 19823
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHPLQGMFGEKSLTKIAGIYDDKPPAEALAGRLLRLHGLRPGQVRLLGPQDARASRAD CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH LFGRALEPEQRGVFRTLPRSHLVTGLAGALAGVLFYAWLLRGSQPVVADSPLQAFLAIVG HHHCCCCHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH IATAFGVLLGGLVSLRPDHLRLITQVRSALRDGHWAVVVHPTDPHQAQLARDLLDGSHPG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCC KIVTAL CEEECC >Mature Secondary Structure TDHPLQGMFGEKSLTKIAGIYDDKPPAEALAGRLLRLHGLRPGQVRLLGPQDARASRAD CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH LFGRALEPEQRGVFRTLPRSHLVTGLAGALAGVLFYAWLLRGSQPVVADSPLQAFLAIVG HHHCCCCHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH IATAFGVLLGGLVSLRPDHLRLITQVRSALRDGHWAVVVHPTDPHQAQLARDLLDGSHPG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCC KIVTAL CEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA