Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is livK [C]
Identifier: 120612055
GI number: 120612055
Start: 3757666
End: 3758805
Strand: Direct
Name: livK [C]
Synonym: Aave_3401
Alternate gene names: 120612055
Gene position: 3757666-3758805 (Clockwise)
Preceding gene: 120612054
Following gene: 120612060
Centisome position: 70.2
GC content: 66.23
Gene sequence:
>1140_bases ATGAGCAAGACCCAAACGATATTCCGCCTGACCGCCATGGCCCTGGGACTGGCCTGCGCGGCCGCCCATGCCCAGGCACA GGAGCGTGTCCGCATCGGCTTCATGAGCCCCGTCACGGGCCCGCAGGCGGCCAACGGAGGAGACAACCGCGACGGCGCCC TGCTCGCCATCAAGGAACTGAACGCCAAGGGCGTCAAGGTGGCCGGCAAGCCCGTGGTGTTCGAGCTGGACATCAACGAC GACGTGGCCGATCCCAAGCAGGGCGTGCAGGTCGCCCAGACACTTGCCGACAAGAAGATCCGCTTCGTGCTCGGCCCCTA CAACTCGGGCGTCACGGTGCCCGCCGCGCGGGTGCTGAACGACTCGGACATCCTCACGCTCACCGTGGCCTCCAACCCGA AGATCACGGAACTCGGCTACGGCACGCTGTTCCGCATCGGCGCCAGCGACAACCAGCTGGGCACCAAGATGGCCACCTAC GCGGCGCAGGACCTGAAGCTCAAGACGGTGGCCGTGATCGACGACCGCACCGCCTACGGCCAGGGCGTCGCGCGCGAATT CACGGCGCAGGCCAGGCGCCTGGGCCTGCAGGTCGTGGCCACCGAATTCACCACCGACAAGGCCACGGATTTCAGCGCCA TCCTGACCAACATCCGCGGCGCCAAGGCCGAGGCCGTGTTCTACGGTGGCTACTCGCCCCAGGGCGGCCCCCTGCTCAAG CAGATGCGCGCCCTCGGCATCACCGGGCCCCTGCTCGGCGGCGACGGCATCTGCTCCACCGAGACCGCCAACCTGGCCCA GCTCACCGGTGACCTGAACGTCTATTGCACCCAGGGCGGCTCGCTGCTGGACAAGAGCGACAAGGGCCAGAAATTCGCCG AGCGCTACCGCGCCGAATACAAGCGGGACCCGCTCACCTATGCCGCCGCCTTCTACGACGGCATGTACCTGCTGGCCAAC GCCATGGAGTCGACCCAGTCCACCACCGACACGAAGAAGATCGCCCAGGCGATCGCCAATGGCAAATATGCCGGCGTGAC GGGCGAGTTTTCGTACGACGTCAAGCACGACCTGAAGTTGTCGGCGGTGACGGTGTACACCTTCAAGGGCAAGGACGTGG TGCCGCTGAAGAGCCTGTAA
Upstream 100 bases:
>100_bases CGGTCCGCCCGGCCACGAGCCAGGCAGGCCTTCCTGCCTGCCGGGGCACCAGGCCCATACGATCGCCGTGCCCCATCCCT GCATCACAAGGAACATGCCA
Downstream 100 bases:
>100_bases GCAGGACGGCCCCGGGGCCGCCTGGGGCCGGCGCCTGCGAGCAGCAGCCTTCCGGCAATGAAGCCGCTGCGGCGTAAGGC GTCAGGCATGGGGCCGAGCA
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MSKTQTIFRLTAMALGLACAAAHAQAQERVRIGFMSPVTGPQAANGGDNRDGALLAIKELNAKGVKVAGKPVVFELDIND DVADPKQGVQVAQTLADKKIRFVLGPYNSGVTVPAARVLNDSDILTLTVASNPKITELGYGTLFRIGASDNQLGTKMATY AAQDLKLKTVAVIDDRTAYGQGVAREFTAQARRLGLQVVATEFTTDKATDFSAILTNIRGAKAEAVFYGGYSPQGGPLLK QMRALGITGPLLGGDGICSTETANLAQLTGDLNVYCTQGGSLLDKSDKGQKFAERYRAEYKRDPLTYAAAFYDGMYLLAN AMESTQSTTDTKKIAQAIANGKYAGVTGEFSYDVKHDLKLSAVTVYTFKGKDVVPLKSL
Sequences:
>Translated_379_residues MSKTQTIFRLTAMALGLACAAAHAQAQERVRIGFMSPVTGPQAANGGDNRDGALLAIKELNAKGVKVAGKPVVFELDIND DVADPKQGVQVAQTLADKKIRFVLGPYNSGVTVPAARVLNDSDILTLTVASNPKITELGYGTLFRIGASDNQLGTKMATY AAQDLKLKTVAVIDDRTAYGQGVAREFTAQARRLGLQVVATEFTTDKATDFSAILTNIRGAKAEAVFYGGYSPQGGPLLK QMRALGITGPLLGGDGICSTETANLAQLTGDLNVYCTQGGSLLDKSDKGQKFAERYRAEYKRDPLTYAAAFYDGMYLLAN AMESTQSTTDTKKIAQAIANGKYAGVTGEFSYDVKHDLKLSAVTVYTFKGKDVVPLKSL >Mature_378_residues SKTQTIFRLTAMALGLACAAAHAQAQERVRIGFMSPVTGPQAANGGDNRDGALLAIKELNAKGVKVAGKPVVFELDINDD VADPKQGVQVAQTLADKKIRFVLGPYNSGVTVPAARVLNDSDILTLTVASNPKITELGYGTLFRIGASDNQLGTKMATYA AQDLKLKTVAVIDDRTAYGQGVAREFTAQARRLGLQVVATEFTTDKATDFSAILTNIRGAKAEAVFYGGYSPQGGPLLKQ MRALGITGPLLGGDGICSTETANLAQLTGDLNVYCTQGGSLLDKSDKGQKFAERYRAEYKRDPLTYAAAFYDGMYLLANA MESTQSTTDTKKIAQAIANGKYAGVTGEFSYDVKHDLKLSAVTVYTFKGKDVVPLKSL
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=357, Percent_Identity=30.812324929972, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI48994941, Length=354, Percent_Identity=26.8361581920904, Blast_Score=129, Evalue=2e-31,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40306; Mature: 40175
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTQTIFRLTAMALGLACAAAHAQAQERVRIGFMSPVTGPQAANGGDNRDGALLAIKEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEEEC NAKGVKVAGKPVVFELDINDDVADPKQGVQVAQTLADKKIRFVLGPYNSGVTVPAARVLN CCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCC DSDILTLTVASNPKITELGYGTLFRIGASDNQLGTKMATYAAQDLKLKTVAVIDDRTAYG CCCEEEEEEECCCCEEEECCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEEECCCHHC QGVAREFTAQARRLGLQVVATEFTTDKATDFSAILTNIRGAKAEAVFYGGYSPQGGPLLK CCHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHH QMRALGITGPLLGGDGICSTETANLAQLTGDLNVYCTQGGSLLDKSDKGQKFAERYRAEY HHHHHCCCCCCCCCCCCCCCCCCCHHEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH KRDPLTYAAAFYDGMYLLANAMESTQSTTDTKKIAQAIANGKYAGVTGEFSYDVKHDLKL CCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCCEEECCCCCCEE SAVTVYTFKGKDVVPLKSL EEEEEEEECCCCCCCCCCC >Mature Secondary Structure SKTQTIFRLTAMALGLACAAAHAQAQERVRIGFMSPVTGPQAANGGDNRDGALLAIKEL CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEEEC NAKGVKVAGKPVVFELDINDDVADPKQGVQVAQTLADKKIRFVLGPYNSGVTVPAARVLN CCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCC DSDILTLTVASNPKITELGYGTLFRIGASDNQLGTKMATYAAQDLKLKTVAVIDDRTAYG CCCEEEEEEECCCCEEEECCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEEECCCHHC QGVAREFTAQARRLGLQVVATEFTTDKATDFSAILTNIRGAKAEAVFYGGYSPQGGPLLK CCHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHH QMRALGITGPLLGGDGICSTETANLAQLTGDLNVYCTQGGSLLDKSDKGQKFAERYRAEY HHHHHCCCCCCCCCCCCCCCCCCCHHEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH KRDPLTYAAAFYDGMYLLANAMESTQSTTDTKKIAQAIANGKYAGVTGEFSYDVKHDLKL CCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCCEEECCCCCCEE SAVTVYTFKGKDVVPLKSL EEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA