Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612025
Identifier: 120612025
GI number: 120612025
Start: 3727180
End: 3727728
Strand: Direct
Name: 120612025
Synonym: Aave_3371
Alternate gene names: NA
Gene position: 3727180-3727728 (Clockwise)
Preceding gene: 120612016
Following gene: 120612028
Centisome position: 69.63
GC content: 73.77
Gene sequence:
>549_bases ATGGCGCGGCCGGGGGGCGGGCGCTACACTGGCCGCATGAAACTCCACCGGCTTCTCGTGCTCGCCTGCGCCTGCTCCTG GGCGCTGGGGGCTTCGGCGCAATGGCAATGGATCGACAAGGACGGCCGCAAGGTGTTCAGCGACCGTCCGCCCCCGACCG ACGTGCCCGCGAATAACATCCTCAAGCAGCCGGGGGGCGCCCCGCCGCCGCCCCGCGCGCAGGCGGCCAATGCCGCAGCC GACGCGCCCGGCACACCGGCATCCGCCGCGGGCGCGCCGCGGCTGCCGGCCTCCGACCCGGAACTGCAGCAGCGCAAGGC GCAGGCAGAGGCCGCCGAGGCCGCCCGCAAGAAGGCCGGCGAGGAACGCCAGGCCAAGGCCCGTGCCGAGAACTGCCAGC GCGCGCGCCAGCAGCAGGCCATGCTGTCGTCGGGCCAGCTCGTGAGCCAGGTGAATGCCCAGGGTGAGCGCGCCTTCATG GACGATGCGACCCGCGCCGCGGAATTGCGCCGGGCTGAAACGGTCATCGCCTCCGACTGCGCACGCTGA
Upstream 100 bases:
>100_bases AAGGTGAGCGCTTTTCCTAGAAGGCGCATGAGATTCGCTCCAAAAAAACGATTGTACCCGCCGGGCCGCTTCCACCGCCG CGCCGGGTCTTGCCGGTCCC
Downstream 100 bases:
>100_bases AGCCGGCCTTCGTGCCTGCGGCAACTCCGGGTTCTCAATACCCGGCCTTGGCACCCGGGCGGCGCGCGGCGAACAGCCCC GTGGCCCGTGTCCCCTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MARPGGGRYTGRMKLHRLLVLACACSWALGASAQWQWIDKDGRKVFSDRPPPTDVPANNILKQPGGAPPPPRAQAANAAA DAPGTPASAAGAPRLPASDPELQQRKAQAEAAEAARKKAGEERQAKARAENCQRARQQQAMLSSGQLVSQVNAQGERAFM DDATRAAELRRAETVIASDCAR
Sequences:
>Translated_182_residues MARPGGGRYTGRMKLHRLLVLACACSWALGASAQWQWIDKDGRKVFSDRPPPTDVPANNILKQPGGAPPPPRAQAANAAA DAPGTPASAAGAPRLPASDPELQQRKAQAEAAEAARKKAGEERQAKARAENCQRARQQQAMLSSGQLVSQVNAQGERAFM DDATRAAELRRAETVIASDCAR >Mature_181_residues ARPGGGRYTGRMKLHRLLVLACACSWALGASAQWQWIDKDGRKVFSDRPPPTDVPANNILKQPGGAPPPPRAQAANAAAD APGTPASAAGAPRLPASDPELQQRKAQAEAAEAARKKAGEERQAKARAENCQRARQQQAMLSSGQLVSQVNAQGERAFMD DATRAAELRRAETVIASDCAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19302; Mature: 19171
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPGGGRYTGRMKLHRLLVLACACSWALGASAQWQWIDKDGRKVFSDRPPPTDVPANNI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCCCHHHH LKQPGGAPPPPRAQAANAAADAPGTPASAAGAPRLPASDPELQQRKAQAEAAEAARKKAG HHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC EERQAKARAENCQRARQQQAMLSSGQLVSQVNAQGERAFMDDATRAAELRRAETVIASDC HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC AR CC >Mature Secondary Structure ARPGGGRYTGRMKLHRLLVLACACSWALGASAQWQWIDKDGRKVFSDRPPPTDVPANNI CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCCCHHHH LKQPGGAPPPPRAQAANAAADAPGTPASAAGAPRLPASDPELQQRKAQAEAAEAARKKAG HHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC EERQAKARAENCQRARQQQAMLSSGQLVSQVNAQGERAFMDDATRAAELRRAETVIASDC HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC AR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA