Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612023
Identifier: 120612023
GI number: 120612023
Start: 3725169
End: 3725429
Strand: Reverse
Name: 120612023
Synonym: Aave_3369
Alternate gene names: NA
Gene position: 3725429-3725169 (Counterclockwise)
Preceding gene: 120612024
Following gene: 120612022
Centisome position: 69.6
GC content: 70.11
Gene sequence:
>261_bases ATGCAGACCGTCGGCATCTACGAAGCCAAGACCCGCTTTTCCGCGCTCATCGAGGCGGTGGAGCAGGGCGAGGAGGTGCG CATCACCCGCCATGGCAAGGAGGTGGTGCGCATGCTGCCGGTGCGGCGCCGGCCCGTGATCACGGACGAGCAGATCGCAC GCGAGCTGGGGCAGATCGATGCGCTGCATGCCAGCATCCGTGCCGCGACCCAGGACACGGCGGCGCCGGCCCTGCGCCGC AGCGGACGGAGCACCGCATGA
Upstream 100 bases:
>100_bases TCGCTATTCTGGTCTGATTGCCAGGGTCTGGTCTGTTTGATAAAGTCTGGTCTGAATTCTTGTTCAGGCCAGACTTTTCT TTTTCCGGAACCCTTTGCGC
Downstream 100 bases:
>100_bases CCACCGCCTTCGTGCTCGATGCTTCCGTGACCGCCGCCTGGCTCCTGCCCGATGCAGCCAGCGATCACACGCGGCGCCTC TATGCCCGCATCCGCCGCGA
Product: prevent-host-death family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MQTVGIYEAKTRFSALIEAVEQGEEVRITRHGKEVVRMLPVRRRPVITDEQIARELGQIDALHASIRAATQDTAAPALRR SGRSTA
Sequences:
>Translated_86_residues MQTVGIYEAKTRFSALIEAVEQGEEVRITRHGKEVVRMLPVRRRPVITDEQIARELGQIDALHASIRAATQDTAAPALRR SGRSTA >Mature_86_residues MQTVGIYEAKTRFSALIEAVEQGEEVRITRHGKEVVRMLPVRRRPVITDEQIARELGQIDALHASIRAATQDTAAPALRR SGRSTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9552; Mature: 9552
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTVGIYEAKTRFSALIEAVEQGEEVRITRHGKEVVRMLPVRRRPVITDEQIARELGQID CCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH ALHASIRAATQDTAAPALRRSGRSTA HHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQTVGIYEAKTRFSALIEAVEQGEEVRITRHGKEVVRMLPVRRRPVITDEQIARELGQID CCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH ALHASIRAATQDTAAPALRRSGRSTA HHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA