Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612010
Identifier: 120612010
GI number: 120612010
Start: 3711525
End: 3712154
Strand: Reverse
Name: 120612010
Synonym: Aave_3356
Alternate gene names: NA
Gene position: 3712154-3711525 (Counterclockwise)
Preceding gene: 120612011
Following gene: 120612009
Centisome position: 69.35
GC content: 64.44
Gene sequence:
>630_bases ATGCGGACCATCCAGAAGGGGCCGGAGCCCGCGACCTTGACACAGCATCGCCAGCAGCCGCATGCCGACTACGACAATTA CGCCGACAAGGCGACTTTGCAGCAGGCGCTGGTGGCCGAGCAGCGCGGCCTGTGCTGCTACTGCCAGTCGCGCATCCGGG CCACGCCCGAGGGCATGAAGATCGAGCACTGGCAATGTCAGGCCAGCCACCCCGGGCGGCAGCTCGATTTTGGCAATCTG CACGGCGCCTGTCTGGGCGGGCACGGCCGTCCCGAGCGCGAGCAGCATTGCGATACGCGCAAGGGCAATGACGGCCTTTG CTTCAGCGTATGCGACCCGGCGCACCCCATCGAGTACAAGATTCGCTTTTTAGGCGATGGCACCATCAAGGCAGACGATG CCGCCATCGAAGAAGCCCTCACCGCGGTGCTCAACCCGAACCTGCCGCGCCTGGTGAGCAATCGCAAGGCGGTGCTCGCT GCGTTTCAGCAGCGCCTGCAAGACGGCCGTCGCGTTGATCCGGCGCGTGAGCTACCCAAGTGGGATGGCAGCGAATCCGG CGACCTGCCCGAGTTCGCACAGGTGGTCGTCTATTGGCTACGAAAGAAACAAGCGAGGACCGCCGTATGA
Upstream 100 bases:
>100_bases GCGTGCCGCCATTGCGGCCCTCGAACGCAAGCTGGGCGAGGACGAGCCCGAGCTGACCCGGGCCAGTTCGCTGATCCGCT TTCTGGAGGGCGCCGAGTAG
Downstream 100 bases:
>100_bases AGCGCACCAGTGAAGTCGCATTCGAAACCGCCATCGAGGCGGTCTTGCTGAGTGAAGGATATACGCGGGTCGACGTCAAA GGCTTCGACCGCGAGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MRTIQKGPEPATLTQHRQQPHADYDNYADKATLQQALVAEQRGLCCYCQSRIRATPEGMKIEHWQCQASHPGRQLDFGNL HGACLGGHGRPEREQHCDTRKGNDGLCFSVCDPAHPIEYKIRFLGDGTIKADDAAIEEALTAVLNPNLPRLVSNRKAVLA AFQQRLQDGRRVDPARELPKWDGSESGDLPEFAQVVVYWLRKKQARTAV
Sequences:
>Translated_209_residues MRTIQKGPEPATLTQHRQQPHADYDNYADKATLQQALVAEQRGLCCYCQSRIRATPEGMKIEHWQCQASHPGRQLDFGNL HGACLGGHGRPEREQHCDTRKGNDGLCFSVCDPAHPIEYKIRFLGDGTIKADDAAIEEALTAVLNPNLPRLVSNRKAVLA AFQQRLQDGRRVDPARELPKWDGSESGDLPEFAQVVVYWLRKKQARTAV >Mature_209_residues MRTIQKGPEPATLTQHRQQPHADYDNYADKATLQQALVAEQRGLCCYCQSRIRATPEGMKIEHWQCQASHPGRQLDFGNL HGACLGGHGRPEREQHCDTRKGNDGLCFSVCDPAHPIEYKIRFLGDGTIKADDAAIEEALTAVLNPNLPRLVSNRKAVLA AFQQRLQDGRRVDPARELPKWDGSESGDLPEFAQVVVYWLRKKQARTAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23422; Mature: 23422
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIQKGPEPATLTQHRQQPHADYDNYADKATLQQALVAEQRGLCCYCQSRIRATPEGMK CCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCE IEHWQCQASHPGRQLDFGNLHGACLGGHGRPEREQHCDTRKGNDGLCFSVCDPAHPIEYK EEEEEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCEEE IRFLGDGTIKADDAAIEEALTAVLNPNLPRLVSNRKAVLAAFQQRLQDGRRVDPARELPK EEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC WDGSESGDLPEFAQVVVYWLRKKQARTAV CCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRTIQKGPEPATLTQHRQQPHADYDNYADKATLQQALVAEQRGLCCYCQSRIRATPEGMK CCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCE IEHWQCQASHPGRQLDFGNLHGACLGGHGRPEREQHCDTRKGNDGLCFSVCDPAHPIEYK EEEEEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCEEE IRFLGDGTIKADDAAIEEALTAVLNPNLPRLVSNRKAVLAAFQQRLQDGRRVDPARELPK EEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC WDGSESGDLPEFAQVVVYWLRKKQARTAV CCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA