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The map label for this gene is rhsC [C]

Identifier: 120611994

GI number: 120611994

Start: 3690002

End: 3690610

Strand: Reverse

Name: rhsC [C]

Synonym: Aave_3340

Alternate gene names: 120611994

Gene position: 3690610-3690002 (Counterclockwise)

Preceding gene: 120611995

Following gene: 120611993

Centisome position: 68.95

GC content: 52.55

Gene sequence:

>609_bases
TTGATCGACGCGACAACTACCTTGACATGCTCCGGCACGAAACGAGCCAGCGACCGTGCCTATGCCGCAGAACCTGCGCT
TGCAGGGGCAGTCCTGGACCGGAAGACCGGGCTGCACTACAACACCTTTCGGTACTATGACGCGGATCTGGGAGCGTTCA
CTACGCCGGATCCTATCGGGTTGGCGGGAGGAGTAAATCTCCATGAGTACGCGCCAAATCCGTTGTCTTGGATTGACCCG
TTGGGATGGTGTAAAGGGCTGAGTGGCGGCAACTGGAAGTTCAATCCAGTCAAAGACGTCGACATGAGAGGTGGAGCGTC
GTATCGCAGCGCTCTTGATGAAGCATTCCGAAGAACCGGTGTTCCAAAAGAACAGTTTACGGTAACGAAATGGGGTAAAA
CAATCGACGGCAAAAGCATTCCGGTTGAATACACCGGACCAGGAGGCGCCAATGTTAATATGGATATCCCGTCTCTTGAT
AACGTTAAGTCAAATGGTGGTTTGGGAGAGGGGCCTCATCAACCCCATATTGGTTACCAAACTCCTGGGAAAGGGTCGAG
TAGAACTCGAGGGCATATTTTTGTGGATAACGTTCCTGCAACGAGGTAA

Upstream 100 bases:

>100_bases
CCCGCAACTGGGCGCCGGTCCAATCGGTCACGCTCAACCCTGAGCGCGACGGCATCTCCAATGCCGCGGCGACCGCATCG
AATACGCAGCCTCGGGCTGC

Downstream 100 bases:

>100_bases
AGATGCAAAAAACTAAGATTTCAGAATTGCTGGACGCTTGCTCTGTTTTGAATTTGCCAGCAAAAGAAATAAGTGCGGAA
AATTTTGAGGATAAGAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: YD Repeat-Containing Protein; YD Repeat Protein; Rhs-Family Protein; RHS Protein; RHS Family Protein; Rhs Protein; RhsD Protein; RHS/YD Repeat-Containing Protein; Rhs-Related Protein; YD Repeat/RHS Repeat Protein; RHS-Like Protein; Nucleotidyltransferase; Core Protein; RHS-Family Protein; Rhs-Related Transmembrane Protein YD Repeat Protein; YD Repeat; YD Repeat-/RHS Repeat-Containing Protein; Rhs-Like Core Protein; Rhs-Related Membrane Protein; RHS Repeat-Like Protein; Rhs Family Protein-Like Protein; Transposase Protein

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MIDATTTLTCSGTKRASDRAYAAEPALAGAVLDRKTGLHYNTFRYYDADLGAFTTPDPIGLAGGVNLHEYAPNPLSWIDP
LGWCKGLSGGNWKFNPVKDVDMRGGASYRSALDEAFRRTGVPKEQFTVTKWGKTIDGKSIPVEYTGPGGANVNMDIPSLD
NVKSNGGLGEGPHQPHIGYQTPGKGSSRTRGHIFVDNVPATR

Sequences:

>Translated_202_residues
MIDATTTLTCSGTKRASDRAYAAEPALAGAVLDRKTGLHYNTFRYYDADLGAFTTPDPIGLAGGVNLHEYAPNPLSWIDP
LGWCKGLSGGNWKFNPVKDVDMRGGASYRSALDEAFRRTGVPKEQFTVTKWGKTIDGKSIPVEYTGPGGANVNMDIPSLD
NVKSNGGLGEGPHQPHIGYQTPGKGSSRTRGHIFVDNVPATR
>Mature_202_residues
MIDATTTLTCSGTKRASDRAYAAEPALAGAVLDRKTGLHYNTFRYYDADLGAFTTPDPIGLAGGVNLHEYAPNPLSWIDP
LGWCKGLSGGNWKFNPVKDVDMRGGASYRSALDEAFRRTGVPKEQFTVTKWGKTIDGKSIPVEYTGPGGANVNMDIPSLD
NVKSNGGLGEGPHQPHIGYQTPGKGSSRTRGHIFVDNVPATR

Specific function: Rhs Elements Have A Nonessential Function. They May Play An Important Role In The Natural Ecology Of The Cell. [C]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786917, Length=56, Percent_Identity=53.5714285714286, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI48994942, Length=67, Percent_Identity=50.7462686567164, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1786706, Length=59, Percent_Identity=49.1525423728814, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21625; Mature: 21625

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDATTTLTCSGTKRASDRAYAAEPALAGAVLDRKTGLHYNTFRYYDADLGAFTTPDPIG
CCCCCEEEEECCCCCCCCCCEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC
LAGGVNLHEYAPNPLSWIDPLGWCKGLSGGNWKFNPVKDVDMRGGASYRSALDEAFRRTG
CCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCC
VPKEQFTVTKWGKTIDGKSIPVEYTGPGGANVNMDIPSLDNVKSNGGLGEGPHQPHIGYQ
CCHHHEEEEECCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
TPGKGSSRTRGHIFVDNVPATR
CCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MIDATTTLTCSGTKRASDRAYAAEPALAGAVLDRKTGLHYNTFRYYDADLGAFTTPDPIG
CCCCCEEEEECCCCCCCCCCEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC
LAGGVNLHEYAPNPLSWIDPLGWCKGLSGGNWKFNPVKDVDMRGGASYRSALDEAFRRTG
CCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCC
VPKEQFTVTKWGKTIDGKSIPVEYTGPGGANVNMDIPSLDNVKSNGGLGEGPHQPHIGYQ
CCHHHEEEEECCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
TPGKGSSRTRGHIFVDNVPATR
CCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA