Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is glcG [H]
Identifier: 120611971
GI number: 120611971
Start: 3665481
End: 3665888
Strand: Reverse
Name: glcG [H]
Synonym: Aave_3315
Alternate gene names: 120611971
Gene position: 3665888-3665481 (Counterclockwise)
Preceding gene: 120611974
Following gene: 120611964
Centisome position: 68.49
GC content: 69.36
Gene sequence:
>408_bases ATGAAGACCAAACCCGAACTCGAATTCGCCGACGTCAAGAAAATCGCTGCCGCCGCGGAGGCGGAAGCCGTGCGCAACGG CTGGGCGGTGACCATCGCCATCGTGGACGACGGCGGCCATCTCCTCTCGCTGCAGCGCCTGGACGGTGCCGCACCGCTGT CGTCGCACATCGCCCCGGGCAAGGCCCGCACGGCCGCCCTGGGCCGCCGCGAGAGCAAGGTGTACGAAGACATCATCAAC GGCGGCCGCACCGCCTTCCTGACGGCACCCTTCATCGACGGGATGCTCGAAGGCGGCGTGCCGATCCTGAAGGACGGCCA GTGCCTGGGCGCCGTGGGCGTGAGCGGCGTGAAATCCAGCGAGGACGCGCAGATCGCCCGCGCCGGCATCGCGGCCATCG GCCTCTGA
Upstream 100 bases:
>100_bases GTGGAGGGCGACGCGGGAGATATCCTCCGCAGGTTCCGTACCGGCCGGACGCGGTCGCGGCCTGCCGATCCTCCATCCGT TTTCCATTCCACCGGATCCC
Downstream 100 bases:
>100_bases TCCGGCCCGCGCCGGCGCCCGCACTCCCGCGGTGCAGACCACAAGCAAAAAACCGGCCTCGAAAGGCCGGTTTTTCTTTG GGAGGCGCTGTGGGAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKTKPELEFADVKKIAAAAEAEAVRNGWAVTIAIVDDGGHLLSLQRLDGAAPLSSHIAPGKARTAALGRRESKVYEDIIN GGRTAFLTAPFIDGMLEGGVPILKDGQCLGAVGVSGVKSSEDAQIARAGIAAIGL
Sequences:
>Translated_135_residues MKTKPELEFADVKKIAAAAEAEAVRNGWAVTIAIVDDGGHLLSLQRLDGAAPLSSHIAPGKARTAALGRRESKVYEDIIN GGRTAFLTAPFIDGMLEGGVPILKDGQCLGAVGVSGVKSSEDAQIARAGIAAIGL >Mature_135_residues MKTKPELEFADVKKIAAAAEAEAVRNGWAVTIAIVDDGGHLLSLQRLDGAAPLSSHIAPGKARTAALGRRESKVYEDIIN GGRTAFLTAPFIDGMLEGGVPILKDGQCLGAVGVSGVKSSEDAQIARAGIAAIGL
Specific function: Unknown
COG id: COG3193
COG function: function code R; Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glcG family [H]
Homologues:
Organism=Escherichia coli, GI1789349, Length=117, Percent_Identity=57.2649572649573, Blast_Score=137, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005624 [H]
Pfam domain/function: PF03928 DUF336 [H]
EC number: NA
Molecular weight: Translated: 13834; Mature: 13834
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKPELEFADVKKIAAAAEAEAVRNGWAVTIAIVDDGGHLLSLQRLDGAAPLSSHIAPG CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCC KARTAALGRRESKVYEDIINGGRTAFLTAPFIDGMLEGGVPILKDGQCLGAVGVSGVKSS CHHHHHHCCHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCEEECCCEEECCCCCCCCCC EDAQIARAGIAAIGL CCHHHHHHCCHHCCC >Mature Secondary Structure MKTKPELEFADVKKIAAAAEAEAVRNGWAVTIAIVDDGGHLLSLQRLDGAAPLSSHIAPG CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCC KARTAALGRRESKVYEDIINGGRTAFLTAPFIDGMLEGGVPILKDGQCLGAVGVSGVKSS CHHHHHHCCHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCEEECCCEEECCCCCCCCCC EDAQIARAGIAAIGL CCHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]