Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611952
Identifier: 120611952
GI number: 120611952
Start: 3646617
End: 3648425
Strand: Direct
Name: 120611952
Synonym: Aave_3296
Alternate gene names: NA
Gene position: 3646617-3648425 (Clockwise)
Preceding gene: 120611950
Following gene: 120611953
Centisome position: 68.13
GC content: 69.98
Gene sequence:
>1809_bases ATGACCACATCGCCCGACCGCCCTCTCGTGCCATCCACCCTGCTCGATGCCATCGAACCCCGCACGCTCGACGACTGGCT CGCGCGCTTCGCCACGCCCGAATGGCGGGGGCGGTTCATCGAAGGCTGGCTGTTCGAGGGCGCCCCGGAGCGCCGCGCGG CCGAGCGGCAACTGGCCGCGGCAGGGGTCCGTGCGCGCCTGCGCAGCGCCTACAAGCCACTCGTCCACTGGTGCATCGAG GAATGGCCCGCCTGCTCCACGGGGGAGCGCCCGGTCACCGCTCTGGTGCGCTATCCCGTTCATCCCGCCGCCAGCCCGCG GCGCTTTCTGCTGGAAGCCTATCCACTCGCGGCGCTGGTGCCGGATTGCGAATTCATCTTCGAGGCCGGGAGCAGCGAGC GGCATTACGAGATCGATCTGGTCTTTCCCGGCGGAGCGCGGCAGTCGCATCGCGTGTTCGCGCCGAACCGGGTCCGGCCG GATGTGACCGGGACCCCCCAACTGTGTCCTTCCGGGTGGCTGCGCGCGGGAACCGCCGACGGCGCCGGCGACCTGCTGGA CGCAGCGCAGGACACCGAATTCGAATGCCTGTTCTGGTGCGCGGTGGATGCCGTCCGGTCGCACCCCTGGCCACGGCAGG AGCCCTATTTCGAACGACTGGACCTGCGCGTGGACCTGCCCGGCTACGAATGCCGGCTGGATGTCGGCCACGAGTGCGTC AGCACCTATGAGGCCATGCACGAGGACCTGTACTTCGGGTTGCTCGAGTTCTTCCAGAAGCACTCGGGCCGCCCTCCCGG CGATCGTCGGCTGCAGCCGGGCCAGATCGTGCCCGACGTCCGCCGGGCCGCCCCGGGCACCGCACCACGCGTCCGGGTAG AGCTGCGTGCTTTCGATACCGGCGCGCAGGACGCCGCGGCCTGGGCGGACACGGATGCAGACCAGCCCCTGGAGGCACTC GGCAAGGCGCCATCCGCCGCGCGCATCGCGCTCGAACTGGATCTGCTGGGCGGCGATGCCTTCGTGGCACGCTCCCGGCA GGGACGCTCCATCGGATGGCGCTACCTGCACGGCAGCCGCTTCCCCGTCCTGGTGAGCGGTGGCCAGCATGCCAACGAAA CCTCCGGCGTGGTAGGGGCCCTGCGCGCCGGCCATGCCCTGGCCGCGCAGCCGGGCGCGCACTTCGCGCTGCTGCCGCTG AAGAACCCCGACGGCTATGCGCTGCACCGCGAACTGGGCGCCCACCATCCGTGCCACATGCAGCACGCCGCACGCTATAC CGCGCTGGGGGACGACCTGGAATACCGGGAAGGCGCACCGCTGTACGAGCGGGAAGCCGTCGAGCAGGCCCTGGCCGTTT CCGGCGCGCAGCTGCACCTCAATCTGCACGGCTATCCCGCCCACGAATGGACGCGTCCGCTCACGGGGTACATCCCCCTC GGTTTCGATCTGTGGACCATTCCCAAGGGATTTTTCCTGATCCTGCGGCACCACCCCGGCTGGGACGGCCGCGCCCGCGA GCTGCTGGAGCGCGTGGCGGCCGAGCTGCGGAATGTACCGGGCCTGCCGGAATTCAATGCGCGCCAGATGGCCCTCTATG AACGCCACGCGGGCCCGCTGACGTTCGAGCAGATCCACGGCACGGCCGTCACCGTATCGGAAACGCCTCACGGCACACCC GTGACGCTCATCACGGAGTTTCCCGACGAAACCGTCCATGGCGAAGCATTCCGCTTCGCGCACGGCGCGCAATGCGCGGC GGTGCTCGCGGCCGAGCGGGCGTGGCAGGACATCATGGCCGGCCGCTGA
Upstream 100 bases:
>100_bases GCCCGGTTTCCATAATGTAGGGGTGGCCGGCCGCGCGCGCCCCTGGAGTTTTTGCGGGGATCGTGCCCGGCTGCGCCCGC CGCCTGCCGACGACCACGCC
Downstream 100 bases:
>100_bases GGCCCCCCGCCGGCCCGGCAGCGCGCCTGGCACGGGACATGCATAGCACCAGCGCGGAGGTTGGGGCATCGGGGTCGCAC CCGGGGTGCCCATCCCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MTTSPDRPLVPSTLLDAIEPRTLDDWLARFATPEWRGRFIEGWLFEGAPERRAAERQLAAAGVRARLRSAYKPLVHWCIE EWPACSTGERPVTALVRYPVHPAASPRRFLLEAYPLAALVPDCEFIFEAGSSERHYEIDLVFPGGARQSHRVFAPNRVRP DVTGTPQLCPSGWLRAGTADGAGDLLDAAQDTEFECLFWCAVDAVRSHPWPRQEPYFERLDLRVDLPGYECRLDVGHECV STYEAMHEDLYFGLLEFFQKHSGRPPGDRRLQPGQIVPDVRRAAPGTAPRVRVELRAFDTGAQDAAAWADTDADQPLEAL GKAPSAARIALELDLLGGDAFVARSRQGRSIGWRYLHGSRFPVLVSGGQHANETSGVVGALRAGHALAAQPGAHFALLPL KNPDGYALHRELGAHHPCHMQHAARYTALGDDLEYREGAPLYEREAVEQALAVSGAQLHLNLHGYPAHEWTRPLTGYIPL GFDLWTIPKGFFLILRHHPGWDGRARELLERVAAELRNVPGLPEFNARQMALYERHAGPLTFEQIHGTAVTVSETPHGTP VTLITEFPDETVHGEAFRFAHGAQCAAVLAAERAWQDIMAGR
Sequences:
>Translated_602_residues MTTSPDRPLVPSTLLDAIEPRTLDDWLARFATPEWRGRFIEGWLFEGAPERRAAERQLAAAGVRARLRSAYKPLVHWCIE EWPACSTGERPVTALVRYPVHPAASPRRFLLEAYPLAALVPDCEFIFEAGSSERHYEIDLVFPGGARQSHRVFAPNRVRP DVTGTPQLCPSGWLRAGTADGAGDLLDAAQDTEFECLFWCAVDAVRSHPWPRQEPYFERLDLRVDLPGYECRLDVGHECV STYEAMHEDLYFGLLEFFQKHSGRPPGDRRLQPGQIVPDVRRAAPGTAPRVRVELRAFDTGAQDAAAWADTDADQPLEAL GKAPSAARIALELDLLGGDAFVARSRQGRSIGWRYLHGSRFPVLVSGGQHANETSGVVGALRAGHALAAQPGAHFALLPL KNPDGYALHRELGAHHPCHMQHAARYTALGDDLEYREGAPLYEREAVEQALAVSGAQLHLNLHGYPAHEWTRPLTGYIPL GFDLWTIPKGFFLILRHHPGWDGRARELLERVAAELRNVPGLPEFNARQMALYERHAGPLTFEQIHGTAVTVSETPHGTP VTLITEFPDETVHGEAFRFAHGAQCAAVLAAERAWQDIMAGR >Mature_601_residues TTSPDRPLVPSTLLDAIEPRTLDDWLARFATPEWRGRFIEGWLFEGAPERRAAERQLAAAGVRARLRSAYKPLVHWCIEE WPACSTGERPVTALVRYPVHPAASPRRFLLEAYPLAALVPDCEFIFEAGSSERHYEIDLVFPGGARQSHRVFAPNRVRPD VTGTPQLCPSGWLRAGTADGAGDLLDAAQDTEFECLFWCAVDAVRSHPWPRQEPYFERLDLRVDLPGYECRLDVGHECVS TYEAMHEDLYFGLLEFFQKHSGRPPGDRRLQPGQIVPDVRRAAPGTAPRVRVELRAFDTGAQDAAAWADTDADQPLEALG KAPSAARIALELDLLGGDAFVARSRQGRSIGWRYLHGSRFPVLVSGGQHANETSGVVGALRAGHALAAQPGAHFALLPLK NPDGYALHRELGAHHPCHMQHAARYTALGDDLEYREGAPLYEREAVEQALAVSGAQLHLNLHGYPAHEWTRPLTGYIPLG FDLWTIPKGFFLILRHHPGWDGRARELLERVAAELRNVPGLPEFNARQMALYERHAGPLTFEQIHGTAVTVSETPHGTPV TLITEFPDETVHGEAFRFAHGAQCAAVLAAERAWQDIMAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66679; Mature: 66548
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSPDRPLVPSTLLDAIEPRTLDDWLARFATPEWRGRFIEGWLFEGAPERRAAERQLAA CCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCHHHCCCEEEEEEECCCCHHHHHHHHHHH AGVRARLRSAYKPLVHWCIEEWPACSTGERPVTALVRYPVHPAASPRRFLLEAYPLAALV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCCCHHHHHHHCCHHHHC PDCEFIFEAGSSERHYEIDLVFPGGARQSHRVFAPNRVRPDVTGTPQLCPSGWLRAGTAD CCHHHHHHCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCC GAGDLLDAAQDTEFECLFWCAVDAVRSHPWPRQEPYFERLDLRVDLPGYECRLDVGHECV CCHHHHHHCCCCCCEEEEEEHHHHHHCCCCCCCCCCHHHCCEEECCCCCEEEECCCHHHH STYEAMHEDLYFGLLEFFQKHSGRPPGDRRLQPGQIVPDVRRAAPGTAPRVRVELRAFDT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEECC GAQDAAAWADTDADQPLEALGKAPSAARIALELDLLGGDAFVARSRQGRSIGWRYLHGSR CCCHHHHHCCCCCCCHHHHHCCCCCCEEEEEEEEEECCCCEEECCCCCCCCCEEEECCCC FPVLVSGGQHANETSGVVGALRAGHALAAQPGAHFALLPLKNPDGYALHRELGAHHPCHM CEEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCEEEEECCCCCCCCHHHHHCCCCCHHH QHAARYTALGDDLEYREGAPLYEREAVEQALAVSGAQLHLNLHGYPAHEWTRPLTGYIPL HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHCCCCCCEEEC GFDLWTIPKGFFLILRHHPGWDGRARELLERVAAELRNVPGLPEFNARQMALYERHAGPL CCCCEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC TFEQIHGTAVTVSETPHGTPVTLITEFPDETVHGEAFRFAHGAQCAAVLAAERAWQDIMA CHHHHCCEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHC GR CC >Mature Secondary Structure TTSPDRPLVPSTLLDAIEPRTLDDWLARFATPEWRGRFIEGWLFEGAPERRAAERQLAA CCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCHHHCCCEEEEEEECCCCHHHHHHHHHHH AGVRARLRSAYKPLVHWCIEEWPACSTGERPVTALVRYPVHPAASPRRFLLEAYPLAALV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCCCHHHHHHHCCHHHHC PDCEFIFEAGSSERHYEIDLVFPGGARQSHRVFAPNRVRPDVTGTPQLCPSGWLRAGTAD CCHHHHHHCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCC GAGDLLDAAQDTEFECLFWCAVDAVRSHPWPRQEPYFERLDLRVDLPGYECRLDVGHECV CCHHHHHHCCCCCCEEEEEEHHHHHHCCCCCCCCCCHHHCCEEECCCCCEEEECCCHHHH STYEAMHEDLYFGLLEFFQKHSGRPPGDRRLQPGQIVPDVRRAAPGTAPRVRVELRAFDT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEECC GAQDAAAWADTDADQPLEALGKAPSAARIALELDLLGGDAFVARSRQGRSIGWRYLHGSR CCCHHHHHCCCCCCCHHHHHCCCCCCEEEEEEEEEECCCCEEECCCCCCCCCEEEECCCC FPVLVSGGQHANETSGVVGALRAGHALAAQPGAHFALLPLKNPDGYALHRELGAHHPCHM CEEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCEEEEECCCCCCCCHHHHHCCCCCHHH QHAARYTALGDDLEYREGAPLYEREAVEQALAVSGAQLHLNLHGYPAHEWTRPLTGYIPL HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHCCCCCCEEEC GFDLWTIPKGFFLILRHHPGWDGRARELLERVAAELRNVPGLPEFNARQMALYERHAGPL CCCCEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC TFEQIHGTAVTVSETPHGTPVTLITEFPDETVHGEAFRFAHGAQCAAVLAAERAWQDIMA CHHHHCCEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHC GR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA