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The map label for this gene is yciM [H]

Identifier: 120611944

GI number: 120611944

Start: 3635085

End: 3636242

Strand: Direct

Name: yciM [H]

Synonym: Aave_3288

Alternate gene names: 120611944

Gene position: 3635085-3636242 (Clockwise)

Preceding gene: 120611943

Following gene: 120611945

Centisome position: 67.91

GC content: 69.6

Gene sequence:

>1158_bases
ATGGAATTTGACCTGAGCTGGCTCCTGCTGGGGCTGCCGCTGGCGTTCGTGCTGGGCTGGCTGGCGTCCCGCTTCGATCT
GCGCCAGTTGCGCCAGGAAAACCGGCGGGCACCCAAGGCCTATTTCAAGGGCCTGAACTACCTGCTCAACGAGCAGCAGG
ACCAGGCGATCGACGCATTCATCGAGGCGGTGCAGAACGATCCGGACACGTCGGAACTGCATTTCGCGCTCGGCAACCTG
TTCCGCCGGCGTGGCGAATACAACCGCGCGGTGCGCGTGCACGAGCACCTGCTGTCCCGAGGCGACCTGAGCCGGGCCGA
CCGCGAGCGCGCGCAGCACGCGCTGGCGCTGGATTTCCTCAAGGCCGGGCTGCTGGACCGCGCTGAAGATGCGCTGCAGC
GGCTGGAAGGCACGCCCTTCGAGAGCCAGGCGCGCATGGCGCTGCTGGCCATCTACGAACGCTCGCGGGACTGGCTCCAG
GCCACCGCGATCGCGCGCAAGATGCATGGATCCCACCAGGGCGATTTCAGCGCCCGGCAGGCCCATTACCTGTGCGAGCA
GGCGCTGGCGCGTGCTGCCCAGGGCGACCTGGATGCGGCGATGGCGCAGTTCGAGGAAGCCCGGGCGACCGCGCCGGATG
CGCCGCGCCCGCGCATCGAGCTTGCCCGGCTGCAGCAGCGCCGCGGCCATGCCGAGGCGGCCATGGCCACGCTCCAGGAA
CTGGCCCGCCAGTCCCCCGGCGCCCTGCCGCTGGCCGCGCCGCTGCTGATCGAACTGGCGGGTGCGACCGGGCGCCAGAG
CGACGTGCTGCAGTTGCTGAAGGAGCACTATGCCCGCGCGCCTTCGCTGGACGTGCTCGACGCGATCGTGGCCATGGAGT
CTGCCGCAGCCGATCCCGCCCGGTCGCCGCGCGACTGGTATGTACGCCACCTGGAGCAGGAGCCCTCGCTCGTCGCCGCC
GCCAAATGGCTGGCGCAGGAAAAACTCGAACACGAGGAATTCCATCCGCAGGTCCAGCGGGCGCTGGACCAGGCCGCCAA
GCCGCTCACGCGCTATCGCTGCGCGGCCTGCGGATTCGAGGCCCGGCAGCATTTCTGGCAATGCCCCGGCTGCCAGAACT
GGGACAGCTATCCCGCCCGGCGCGTCGAAGAGCTGTGA

Upstream 100 bases:

>100_bases
CCGCCCTCGCCCGCCTCCGCGCCCGCCTCCGCGCCGGCGTCCACCGCCTCGGCGGGCAACCCCGCCCCCGTCACCGACCT
GCAGCAGCAGCCGCCCATCC

Downstream 100 bases:

>100_bases
GAGCGTGTCCACAGTCCAGCCCGGCCCCCTCCCGGAGTGCGCCGATACACCGTAGCATGCTCGGGTTTTCATAGCGGTTT
GCGCGGACCTTCCCCGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MEFDLSWLLLGLPLAFVLGWLASRFDLRQLRQENRRAPKAYFKGLNYLLNEQQDQAIDAFIEAVQNDPDTSELHFALGNL
FRRRGEYNRAVRVHEHLLSRGDLSRADRERAQHALALDFLKAGLLDRAEDALQRLEGTPFESQARMALLAIYERSRDWLQ
ATAIARKMHGSHQGDFSARQAHYLCEQALARAAQGDLDAAMAQFEEARATAPDAPRPRIELARLQQRRGHAEAAMATLQE
LARQSPGALPLAAPLLIELAGATGRQSDVLQLLKEHYARAPSLDVLDAIVAMESAAADPARSPRDWYVRHLEQEPSLVAA
AKWLAQEKLEHEEFHPQVQRALDQAAKPLTRYRCAACGFEARQHFWQCPGCQNWDSYPARRVEEL

Sequences:

>Translated_385_residues
MEFDLSWLLLGLPLAFVLGWLASRFDLRQLRQENRRAPKAYFKGLNYLLNEQQDQAIDAFIEAVQNDPDTSELHFALGNL
FRRRGEYNRAVRVHEHLLSRGDLSRADRERAQHALALDFLKAGLLDRAEDALQRLEGTPFESQARMALLAIYERSRDWLQ
ATAIARKMHGSHQGDFSARQAHYLCEQALARAAQGDLDAAMAQFEEARATAPDAPRPRIELARLQQRRGHAEAAMATLQE
LARQSPGALPLAAPLLIELAGATGRQSDVLQLLKEHYARAPSLDVLDAIVAMESAAADPARSPRDWYVRHLEQEPSLVAA
AKWLAQEKLEHEEFHPQVQRALDQAAKPLTRYRCAACGFEARQHFWQCPGCQNWDSYPARRVEEL
>Mature_385_residues
MEFDLSWLLLGLPLAFVLGWLASRFDLRQLRQENRRAPKAYFKGLNYLLNEQQDQAIDAFIEAVQNDPDTSELHFALGNL
FRRRGEYNRAVRVHEHLLSRGDLSRADRERAQHALALDFLKAGLLDRAEDALQRLEGTPFESQARMALLAIYERSRDWLQ
ATAIARKMHGSHQGDFSARQAHYLCEQALARAAQGDLDAAMAQFEEARATAPDAPRPRIELARLQQRRGHAEAAMATLQE
LARQSPGALPLAAPLLIELAGATGRQSDVLQLLKEHYARAPSLDVLDAIVAMESAAADPARSPRDWYVRHLEQEPSLVAA
AKWLAQEKLEHEEFHPQVQRALDQAAKPLTRYRCAACGFEARQHFWQCPGCQNWDSYPARRVEEL

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=384, Percent_Identity=30.46875, Blast_Score=176, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43564; Mature: 43564

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFDLSWLLLGLPLAFVLGWLASRFDLRQLRQENRRAPKAYFKGLNYLLNEQQDQAIDAF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHH
IEAVQNDPDTSELHFALGNLFRRRGEYNRAVRVHEHLLSRGDLSRADRERAQHALALDFL
HHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KAGLLDRAEDALQRLEGTPFESQARMALLAIYERSRDWLQATAIARKMHGSHQGDFSARQ
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
AHYLCEQALARAAQGDLDAAMAQFEEARATAPDAPRPRIELARLQQRRGHAEAAMATLQE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHH
LARQSPGALPLAAPLLIELAGATGRQSDVLQLLKEHYARAPSLDVLDAIVAMESAAADPA
HHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
RSPRDWYVRHLEQEPSLVAAAKWLAQEKLEHEEFHPQVQRALDQAAKPLTRYRCAACGFE
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHH
ARQHFWQCPGCQNWDSYPARRVEEL
HHHHHHCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MEFDLSWLLLGLPLAFVLGWLASRFDLRQLRQENRRAPKAYFKGLNYLLNEQQDQAIDAF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHH
IEAVQNDPDTSELHFALGNLFRRRGEYNRAVRVHEHLLSRGDLSRADRERAQHALALDFL
HHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KAGLLDRAEDALQRLEGTPFESQARMALLAIYERSRDWLQATAIARKMHGSHQGDFSARQ
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
AHYLCEQALARAAQGDLDAAMAQFEEARATAPDAPRPRIELARLQQRRGHAEAAMATLQE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHH
LARQSPGALPLAAPLLIELAGATGRQSDVLQLLKEHYARAPSLDVLDAIVAMESAAADPA
HHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
RSPRDWYVRHLEQEPSLVAAAKWLAQEKLEHEEFHPQVQRALDQAAKPLTRYRCAACGFE
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHH
ARQHFWQCPGCQNWDSYPARRVEEL
HHHHHHCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]