Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611928
Identifier: 120611928
GI number: 120611928
Start: 3616632
End: 3618149
Strand: Reverse
Name: 120611928
Synonym: Aave_3272
Alternate gene names: NA
Gene position: 3618149-3616632 (Counterclockwise)
Preceding gene: 120611929
Following gene: 120611927
Centisome position: 67.59
GC content: 65.42
Gene sequence:
>1518_bases ATGGACGTCCTGCACAACCTCGCGTTCGGCTTCGGCCACGCACTGACGGTACAGAACCTGATGTTCTGCGCCCTGGGCTG CACGGTGGGCACCCTGGTGGGGCTGCTGCCCGGCCTGGGCCCGCTGGCCACCATCAGCCTGCTGCTGCCGCTGACCTACT CGATCGACACCACCGGCGCGCTCATCATGCTGGCCGGCATCTACTACGGAGCGCAGTACGGCGACAGCGTGAGCGCCATC ACGATGAAGATACCGCACGCCAGCAGCATCGTGGCGTGCATCGACGGCTACCAGCTCACGCTCAAGGGCAAGACCGGGTT GGCGCTGTTCACCGCCGGGGTGTCGAGCTTCATCGGCGGTACCGTGGCCATCGTGGTGCTCGCGTTCCTGGCCCCCAGCC TGGGTGAAGTGGCGTTCCTTTTCGGGCCGCCCGACTACTGCGCGCTGATGCTCGTGGGCTTCGTGTGCGTCAGCTTCGTG ACCACGGGCAGCCTGCTCAACGGCCTGGCCATGTGCCTGGTGGGCGTGCTGCTGGGATCGGTGGGCACCGACGTGAACAG CGGCGCGGAGCGCTTCACCCTGGGCCTGCCGTTCCTGGCCGATGGCGTGGGCATCGTGAGCATCGCGCTGGGCTGCTTCG GTATCGCCGAGATCACCAAGAACCTCGATGCGCGCGAGGAGCGCTCCCCTTTCAACGGCAAGATCAAGCTGATCCCGACT TGGGCCGAGTTCAAGCGCATCATTCCGAGCGCGCTGCGCGGCAGCGTGGTGGGTTCGGCCCTCGGCATCCTGCCCGGCGG CGGCCCGGTGATCGCGCAGTTCGCCGCCTACGCCCTGGACAAGAAGGTCAGCAAGTACAAGCACGAGATCGGCAATGGCT CCATCGAGGGCGTGGCCGGACAGGCCGCCGCGGACGAGGCCGCCGCGCGCACCAGCTTCATCCCGCTGATGAGCATCGGC ATTCCCGAGAACGCCGTGATGGCGCTGATGATGGCCGCCTTCATCATCAAGGGCATCCAGCCCGGTCCCAACATGATCGC CGGCCACCCCGAGCTGTTCTGGGGCCTGGTGGCAAGCATGTGGATCGGCAACTGCTTCCTGTTGATCCTGAACGTGCCGC TGGTGCGCTACTGGCTGTCGGTGTTCAAGATCCCGTACAACGTGCTGTTCCCGGCGATCCTTTTCTTCTGCTGCATCGGC ACGTTCAGCATCAACAACAACCTGGACGACATCTACATCACCGTCGTGTTCGGCGTGCTGGGTTACCTGTTCATGCGGCT GGAGCTGGACCCGTCGCCGCTGATGCTGGGCTTCATCCTGGGGCCCATGCTGGAGGAGAATTTCCGCCGTGCCATGCTGC TGTCGCGCGGAAGCTTCGGCGTGTTCATGTCGCGGCCGATCAGCGGCACGCTGCTCAGCCTGATAGGTGCATTCATCCTA TGGCAGGTGGTGGCCTTCTTCCGGCAGCGCAAACAGCGACGGGCGGTGGCCGTACCCGTGGCGGAGCCGGGGGTCTGA
Upstream 100 bases:
>100_bases CAACGTGAAGATCGCGGCGGTGCTGATCGCCGTGGCCTTCGCGTTCCAGAAGCTGCTGGGCCTGAGCCTGCCGCTGTACT GATCCGAAGGGAGCACCGGC
Downstream 100 bases:
>100_bases CCCTCCGGACGGTGGCCGGTGGCGCCTGCCTTGCGTGGGCGTCCATCAGGGTAAACAGGGGGCGGCGGGGCGGTGCCGCC CGCGCGTGGCGGCGGCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MDVLHNLAFGFGHALTVQNLMFCALGCTVGTLVGLLPGLGPLATISLLLPLTYSIDTTGALIMLAGIYYGAQYGDSVSAI TMKIPHASSIVACIDGYQLTLKGKTGLALFTAGVSSFIGGTVAIVVLAFLAPSLGEVAFLFGPPDYCALMLVGFVCVSFV TTGSLLNGLAMCLVGVLLGSVGTDVNSGAERFTLGLPFLADGVGIVSIALGCFGIAEITKNLDAREERSPFNGKIKLIPT WAEFKRIIPSALRGSVVGSALGILPGGGPVIAQFAAYALDKKVSKYKHEIGNGSIEGVAGQAAADEAAARTSFIPLMSIG IPENAVMALMMAAFIIKGIQPGPNMIAGHPELFWGLVASMWIGNCFLLILNVPLVRYWLSVFKIPYNVLFPAILFFCCIG TFSINNNLDDIYITVVFGVLGYLFMRLELDPSPLMLGFILGPMLEENFRRAMLLSRGSFGVFMSRPISGTLLSLIGAFIL WQVVAFFRQRKQRRAVAVPVAEPGV
Sequences:
>Translated_505_residues MDVLHNLAFGFGHALTVQNLMFCALGCTVGTLVGLLPGLGPLATISLLLPLTYSIDTTGALIMLAGIYYGAQYGDSVSAI TMKIPHASSIVACIDGYQLTLKGKTGLALFTAGVSSFIGGTVAIVVLAFLAPSLGEVAFLFGPPDYCALMLVGFVCVSFV TTGSLLNGLAMCLVGVLLGSVGTDVNSGAERFTLGLPFLADGVGIVSIALGCFGIAEITKNLDAREERSPFNGKIKLIPT WAEFKRIIPSALRGSVVGSALGILPGGGPVIAQFAAYALDKKVSKYKHEIGNGSIEGVAGQAAADEAAARTSFIPLMSIG IPENAVMALMMAAFIIKGIQPGPNMIAGHPELFWGLVASMWIGNCFLLILNVPLVRYWLSVFKIPYNVLFPAILFFCCIG TFSINNNLDDIYITVVFGVLGYLFMRLELDPSPLMLGFILGPMLEENFRRAMLLSRGSFGVFMSRPISGTLLSLIGAFIL WQVVAFFRQRKQRRAVAVPVAEPGV >Mature_505_residues MDVLHNLAFGFGHALTVQNLMFCALGCTVGTLVGLLPGLGPLATISLLLPLTYSIDTTGALIMLAGIYYGAQYGDSVSAI TMKIPHASSIVACIDGYQLTLKGKTGLALFTAGVSSFIGGTVAIVVLAFLAPSLGEVAFLFGPPDYCALMLVGFVCVSFV TTGSLLNGLAMCLVGVLLGSVGTDVNSGAERFTLGLPFLADGVGIVSIALGCFGIAEITKNLDAREERSPFNGKIKLIPT WAEFKRIIPSALRGSVVGSALGILPGGGPVIAQFAAYALDKKVSKYKHEIGNGSIEGVAGQAAADEAAARTSFIPLMSIG IPENAVMALMMAAFIIKGIQPGPNMIAGHPELFWGLVASMWIGNCFLLILNVPLVRYWLSVFKIPYNVLFPAILFFCCIG TFSINNNLDDIYITVVFGVLGYLFMRLELDPSPLMLGFILGPMLEENFRRAMLLSRGSFGVFMSRPISGTLLSLIGAFIL WQVVAFFRQRKQRRAVAVPVAEPGV
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 53471; Mature: 53471
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVLHNLAFGFGHALTVQNLMFCALGCTVGTLVGLLPGLGPLATISLLLPLTYSIDTTGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHH LIMLAGIYYGAQYGDSVSAITMKIPHASSIVACIDGYQLTLKGKTGLALFTAGVSSFIGG HHHHHHHHHHHCCCCCEEEEEEECCCCCHHHEEECCEEEEEECCCCHHHHHHHHHHHHHH TVAIVVLAFLAPSLGEVAFLFGPPDYCALMLVGFVCVSFVTTGSLLNGLAMCLVGVLLGS HHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGTDVNSGAERFTLGLPFLADGVGIVSIALGCFGIAEITKNLDAREERSPFNGKIKLIPT CCCCCCCCCCCEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEC WAEFKRIIPSALRGSVVGSALGILPGGGPVIAQFAAYALDKKVSKYKHEIGNGSIEGVAG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC QAAADEAAARTSFIPLMSIGIPENAVMALMMAAFIIKGIQPGPNMIAGHPELFWGLVASM CHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH WIGNCFLLILNVPLVRYWLSVFKIPYNVLFPAILFFCCIGTFSINNNLDDIYITVVFGVL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH GYLFMRLELDPSPLMLGFILGPMLEENFRRAMLLSRGSFGVFMSRPISGTLLSLIGAFIL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHH WQVVAFFRQRKQRRAVAVPVAEPGV HHHHHHHHHHHHCCEEECCCCCCCC >Mature Secondary Structure MDVLHNLAFGFGHALTVQNLMFCALGCTVGTLVGLLPGLGPLATISLLLPLTYSIDTTGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHH LIMLAGIYYGAQYGDSVSAITMKIPHASSIVACIDGYQLTLKGKTGLALFTAGVSSFIGG HHHHHHHHHHHCCCCCEEEEEEECCCCCHHHEEECCEEEEEECCCCHHHHHHHHHHHHHH TVAIVVLAFLAPSLGEVAFLFGPPDYCALMLVGFVCVSFVTTGSLLNGLAMCLVGVLLGS HHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGTDVNSGAERFTLGLPFLADGVGIVSIALGCFGIAEITKNLDAREERSPFNGKIKLIPT CCCCCCCCCCCEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEC WAEFKRIIPSALRGSVVGSALGILPGGGPVIAQFAAYALDKKVSKYKHEIGNGSIEGVAG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC QAAADEAAARTSFIPLMSIGIPENAVMALMMAAFIIKGIQPGPNMIAGHPELFWGLVASM CHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH WIGNCFLLILNVPLVRYWLSVFKIPYNVLFPAILFFCCIGTFSINNNLDDIYITVVFGVL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH GYLFMRLELDPSPLMLGFILGPMLEENFRRAMLLSRGSFGVFMSRPISGTLLSLIGAFIL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHH WQVVAFFRQRKQRRAVAVPVAEPGV HHHHHHHHHHHHCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]