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The map label for this gene is yejB [H]

Identifier: 120611911

GI number: 120611911

Start: 3595516

End: 3596559

Strand: Reverse

Name: yejB [H]

Synonym: Aave_3253

Alternate gene names: 120611911

Gene position: 3596559-3595516 (Counterclockwise)

Preceding gene: 120611912

Following gene: 120611910

Centisome position: 67.19

GC content: 66.38

Gene sequence:

>1044_bases
ATGTTCGCCTACATCGCCAAACGCCTCCTGTTGATGCTGCCCACGCTGCTGGGCGTGCTGCTGCTCACCTTCGTCGTCAT
CCAGTTCGTACCCGGCGGCCCGGTGGAGCAGTACCTGGCGGAGGCCCGCACGGCGGCGGGCAAGGGCGGGGCGGCCGGCG
GGCTGGAGTCCGGCGGCATGAGCTACCGCGGCGACCAGGGCGTGGACCCGAAGCGGCTGGAGCAGATCAAGGCGCTGTAT
GGCTTCGACAAGCCGGCGCACGAGCGGTTCTTCCAGATGCTGGCGCAGTTCGCCCGCTTCGACCTGGGCCGGAGCTTTTT
CCAGAACAAGGAGGTGTGGGCGCTGGTGAAGGAAAAGCTGCCGGTCTCCATCAGCCTGGGGCTGTGGACCTTCTTCATCA
GCTACCTGGTGGCGGTGCCGCTGGGCGTGGCCAAGGCCGTGCGCGCAGGTTCGCGCTTCGACCTGGTGACCACACTGCTC
GTCCTGGTGGGTTATGCGATCCCGGGCTTCGTGCTGGGGGTGGCGCTGCTGGTGGTGTTCGGCGGGCAGCTGCAGTGGTT
CCCGCTGCGCGGGCTGGTGTCGTCCAACTGGGAACAGATGGGCTGGGGCGCGCGCATCGTGGACTACCTCTGGCACATCA
CGCTGCCGGTGACGGCGATGGTGGCGGGCAGCTTCGCGGTGACGGCGATGCTCACCAAGAACGCCTTCCTGGAGGAGATC
CGCAAGCAGTACGTGCTGACCGCGCGGGCCAAGGGCCTGTCGGAGCGGCAGGTGCTCTGGAAGCACGTTTTCCGCAATGC
GCTGATCCCCATCATCACGGGCTTTCCGGCGGCGTTCATCGGCGCGTTCTTCACGGGCTCGCTGCTGATCGAGACGCTGT
TCTCGCTCGACGGCCTGGGCCTGCTGAGCTACGAGAGCGTGATCCGCCGCGACTACCCCGTGGTGCTGGGCACGCTCTAC
CTGTTCACGCTGATCGGGCTGGTCACCAAGCTCGTCAGCGATCTTTGCTATGTGTGGGTCGATCCCCGCGTGAAGTTCGA
CTGA

Upstream 100 bases:

>100_bases
CCGCGGCCAGCGGAAGGGGCGTGCCGCGGCGGTTTCATGGTGCGTGGATGGCGCGTAGCGCCGTCGATCACTGAAGCTTT
GGATTACACCGCGCGCCACC

Downstream 100 bases:

>100_bases
GCGCATGAGTATTCCATCCCCCGACCTTTCCGCTCCGGCCGCCATGCCGTCCACGGCGGCACCCCCGCCCGCGCCGGTGT
CGCTTTCGCCCTCCCGCCGC

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MFAYIAKRLLLMLPTLLGVLLLTFVVIQFVPGGPVEQYLAEARTAAGKGGAAGGLESGGMSYRGDQGVDPKRLEQIKALY
GFDKPAHERFFQMLAQFARFDLGRSFFQNKEVWALVKEKLPVSISLGLWTFFISYLVAVPLGVAKAVRAGSRFDLVTTLL
VLVGYAIPGFVLGVALLVVFGGQLQWFPLRGLVSSNWEQMGWGARIVDYLWHITLPVTAMVAGSFAVTAMLTKNAFLEEI
RKQYVLTARAKGLSERQVLWKHVFRNALIPIITGFPAAFIGAFFTGSLLIETLFSLDGLGLLSYESVIRRDYPVVLGTLY
LFTLIGLVTKLVSDLCYVWVDPRVKFD

Sequences:

>Translated_347_residues
MFAYIAKRLLLMLPTLLGVLLLTFVVIQFVPGGPVEQYLAEARTAAGKGGAAGGLESGGMSYRGDQGVDPKRLEQIKALY
GFDKPAHERFFQMLAQFARFDLGRSFFQNKEVWALVKEKLPVSISLGLWTFFISYLVAVPLGVAKAVRAGSRFDLVTTLL
VLVGYAIPGFVLGVALLVVFGGQLQWFPLRGLVSSNWEQMGWGARIVDYLWHITLPVTAMVAGSFAVTAMLTKNAFLEEI
RKQYVLTARAKGLSERQVLWKHVFRNALIPIITGFPAAFIGAFFTGSLLIETLFSLDGLGLLSYESVIRRDYPVVLGTLY
LFTLIGLVTKLVSDLCYVWVDPRVKFD
>Mature_347_residues
MFAYIAKRLLLMLPTLLGVLLLTFVVIQFVPGGPVEQYLAEARTAAGKGGAAGGLESGGMSYRGDQGVDPKRLEQIKALY
GFDKPAHERFFQMLAQFARFDLGRSFFQNKEVWALVKEKLPVSISLGLWTFFISYLVAVPLGVAKAVRAGSRFDLVTTLL
VLVGYAIPGFVLGVALLVVFGGQLQWFPLRGLVSSNWEQMGWGARIVDYLWHITLPVTAMVAGSFAVTAMLTKNAFLEEI
RKQYVLTARAKGLSERQVLWKHVFRNALIPIITGFPAAFIGAFFTGSLLIETLFSLDGLGLLSYESVIRRDYPVVLGTLY
LFTLIGLVTKLVSDLCYVWVDPRVKFD

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=53.0386740331492, Blast_Score=395, Evalue=1e-111,
Organism=Escherichia coli, GI1789965, Length=361, Percent_Identity=30.7479224376731, Blast_Score=167, Evalue=7e-43,
Organism=Escherichia coli, GI1787497, Length=347, Percent_Identity=27.3775216138329, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1787053, Length=350, Percent_Identity=29.7142857142857, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1789888, Length=346, Percent_Identity=25.7225433526012, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1787761, Length=342, Percent_Identity=27.1929824561404, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787550, Length=264, Percent_Identity=22.7272727272727, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38390; Mature: 38390

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAYIAKRLLLMLPTLLGVLLLTFVVIQFVPGGPVEQYLAEARTAAGKGGAAGGLESGGM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
SYRGDQGVDPKRLEQIKALYGFDKPAHERFFQMLAQFARFDLGRSFFQNKEVWALVKEKL
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PVSISLGLWTFFISYLVAVPLGVAKAVRAGSRFDLVTTLLVLVGYAIPGFVLGVALLVVF
CCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGQLQWFPLRGLVSSNWEQMGWGARIVDYLWHITLPVTAMVAGSFAVTAMLTKNAFLEEI
CCCEEEEECHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQYVLTARAKGLSERQVLWKHVFRNALIPIITGFPAAFIGAFFTGSLLIETLFSLDGLG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
LLSYESVIRRDYPVVLGTLYLFTLIGLVTKLVSDLCYVWVDPRVKFD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFAYIAKRLLLMLPTLLGVLLLTFVVIQFVPGGPVEQYLAEARTAAGKGGAAGGLESGGM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
SYRGDQGVDPKRLEQIKALYGFDKPAHERFFQMLAQFARFDLGRSFFQNKEVWALVKEKL
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PVSISLGLWTFFISYLVAVPLGVAKAVRAGSRFDLVTTLLVLVGYAIPGFVLGVALLVVF
CCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGQLQWFPLRGLVSSNWEQMGWGARIVDYLWHITLPVTAMVAGSFAVTAMLTKNAFLEEI
CCCEEEEECHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQYVLTARAKGLSERQVLWKHVFRNALIPIITGFPAAFIGAFFTGSLLIETLFSLDGLG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
LLSYESVIRRDYPVVLGTLYLFTLIGLVTKLVSDLCYVWVDPRVKFD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]