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The map label for this gene is comL [H]

Identifier: 120611899

GI number: 120611899

Start: 3576869

End: 3577666

Strand: Direct

Name: comL [H]

Synonym: Aave_3241

Alternate gene names: 120611899

Gene position: 3576869-3577666 (Clockwise)

Preceding gene: 120611895

Following gene: 120611901

Centisome position: 66.82

GC content: 65.79

Gene sequence:

>798_bases
ATGCCGCGTTTTTCCCTGCCGCTCTTGACCATCCTGCTTGCCGCGGGCGTGCTCGCGGGCTGCTCCAGCACCCCCGAAGA
CAAGACCGCGGGCTGGAGCCCCAACCGCATCTATTCCGAGGCGCGGGACGAGCTGAACAGCAACTCCTACGACAAGGCCG
TGCCCCTGTTCGAGAAGCTCGAGGGCCGCGCCGCCGGCACCCCGCTCGCGCAGCAGGCCCAGCTGGAAAAGGCCTATGCC
CAGTACAAGGGCGGCGAGAAGGCCCAGGCGATCGCCACGCTCGACCGCTTCATGAAGCTGCACCCCGCGAGCCCGGCCTA
CGACTACGCGCTCTACCTGAAGGGGCTGGTCAACTTCAACGACAACCTCGGGCTGTTCTCCTGGCTGTCGCGCCAGGACC
TCTCCGAGCGCGACCAGAAGGCGGCCAAGGATTCGTTCGAATCCTTCCGCGAACTCACCACGCGCTTTCCCGACTCCCGC
TACGCGCGCGACGCGCAGCAGCGCATGACGTACATCGTCAATTCGCTCGCGCAGTACGAAGTGCACGTGGCCCGCTACTA
CTACCAGCGCGGCGCCTACGTGGCCGCCATCAACCGCGCGCAGATCGCCCTGGCCGACTACAAGGACGTGCCCGCGCTCG
AGGAAGCGCTCTACATCCTCATCAAGTCCTACGACGCGCTGGGCATGACCCAGTTGCGCGACGATGCCCAGCGCGTGATG
GCTGCCTCCTACCCGCAGAGCGAATACATGCGCAACGGCTTCAAGGCGAAGGAGGAGCCGTGGTGGAAGGTCTGGTGA

Upstream 100 bases:

>100_bases
GTGCTGCCCGGCCGGTACAATGGTCCGTTGTCCGCAGCCCGCCGCACCGCGCCGGGCCTGCACCGGCCTCCCCTTCACCG
ATTGTCAGAAAGCCGCTGCC

Downstream 100 bases:

>100_bases
CGGCGGCCAGGCCGCGCAGCGCCTCGTCCCACTCCGCCTCGTCCTGAATCCGGCGCATGGGCGGCAGCGCGGCCAGCAGC
CGCTTGCCGTAGCCCATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MPRFSLPLLTILLAAGVLAGCSSTPEDKTAGWSPNRIYSEARDELNSNSYDKAVPLFEKLEGRAAGTPLAQQAQLEKAYA
QYKGGEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELTTRFPDSR
YARDAQQRMTYIVNSLAQYEVHVARYYYQRGAYVAAINRAQIALADYKDVPALEEALYILIKSYDALGMTQLRDDAQRVM
AASYPQSEYMRNGFKAKEEPWWKVW

Sequences:

>Translated_265_residues
MPRFSLPLLTILLAAGVLAGCSSTPEDKTAGWSPNRIYSEARDELNSNSYDKAVPLFEKLEGRAAGTPLAQQAQLEKAYA
QYKGGEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELTTRFPDSR
YARDAQQRMTYIVNSLAQYEVHVARYYYQRGAYVAAINRAQIALADYKDVPALEEALYILIKSYDALGMTQLRDDAQRVM
AASYPQSEYMRNGFKAKEEPWWKVW
>Mature_264_residues
PRFSLPLLTILLAAGVLAGCSSTPEDKTAGWSPNRIYSEARDELNSNSYDKAVPLFEKLEGRAAGTPLAQQAQLEKAYAQ
YKGGEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELTTRFPDSRY
ARDAQQRMTYIVNSLAQYEVHVARYYYQRGAYVAAINRAQIALADYKDVPALEEALYILIKSYDALGMTQLRDDAQRVMA
ASYPQSEYMRNGFKAKEEPWWKVW

Specific function: Required for efficient transformation of Neisseria gonorrhoeae by species-related DNA [H]

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=226, Percent_Identity=34.9557522123894, Blast_Score=146, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30151; Mature: 30020

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRFSLPLLTILLAAGVLAGCSSTPEDKTAGWSPNRIYSEARDELNSNSYDKAVPLFEKL
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
EGRAAGTPLAQQAQLEKAYAQYKGGEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFN
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
DNLGLFSWLSRQDLSERDQKAAKDSFESFRELTTRFPDSRYARDAQQRMTYIVNSLAQYE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VHVARYYYQRGAYVAAINRAQIALADYKDVPALEEALYILIKSYDALGMTQLRDDAQRVM
HHHHHHHHHCCCEEEEECCHHEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AASYPQSEYMRNGFKAKEEPWWKVW
HHCCCHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRFSLPLLTILLAAGVLAGCSSTPEDKTAGWSPNRIYSEARDELNSNSYDKAVPLFEKL
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
EGRAAGTPLAQQAQLEKAYAQYKGGEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFN
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
DNLGLFSWLSRQDLSERDQKAAKDSFESFRELTTRFPDSRYARDAQQRMTYIVNSLAQYE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VHVARYYYQRGAYVAAINRAQIALADYKDVPALEEALYILIKSYDALGMTQLRDDAQRVM
HHHHHHHHHCCCEEEEECCHHEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AASYPQSEYMRNGFKAKEEPWWKVW
HHCCCHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8830266 [H]