Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611883
Identifier: 120611883
GI number: 120611883
Start: 3555880
End: 3557181
Strand: Reverse
Name: 120611883
Synonym: Aave_3225
Alternate gene names: NA
Gene position: 3557181-3555880 (Counterclockwise)
Preceding gene: 120611884
Following gene: 120611880
Centisome position: 66.45
GC content: 73.89
Gene sequence:
>1302_bases ATGAGCGTTTCCGATTCCAGCCCGGCCGCGGGGGGCGCGACGGCGCTGTCGCTGCACGACGGCCGCCCGTTCTTCGAGAA GGCCCTGGTGCATGGCATCCGCCACGGCATCGTCCCGGCCGAGCGGGTGGAGGCCATCGCGGCCGACGCACCCAAGGGCA TGGTGCAGATCGCCCGCTACTTCGGCACGGAGTTCCTGCGGCCCGACCTGGAGCGCGCGCGCGAGCGCATGGTGAACCTC GTCAGCCTCGACCTGCTCGAGGACAGCGGCGGCGACCTCGACCGCGCCGCGCAGAGCCTGCGCGAGCACAGCTTCCTGTC GCGTTCCAAGGCGGGATCGGACCGGCTGCGCCGCCTGATCGCGCTGCCGCAGAGCAGCAATTTCGGGTTCCTTTCGACCA CCGGCGAGCCGGACGTGCAGCAGCTGTCGGTCTGGTCGCTGCGCAGCCATGCCGAATACCGCGCGGAGCTGGAGCGCCGC ACCGGCATCGCCGCCGCGATCGGGGCCGCCCGCTGGTTCGCGGAGCGCCTGGACCTGGACGAGGGCGCCCTGGAGGCGGC CGGCGCCGAGGCCGAGGCCGTGGTGCGCATGGGCCTGCTGTGGCACTGGATGCATCCGGCGGCCGAGGCCTGGCCGCATG CCGTGTCGTTCGAGAAGCGCCTGTCCGCGATGCGGCGCAAGGGCATTCCCGCGCCGTCGCGCCTGCCGCTGCCCGCCGGC ATGCCGGCCGGGGTGGCGGCCGTGGCGGATGGGCACGTCGCGGCCGTGCTGGCGGACGCCGCGCGCATCCTCGACGCGGC CACGGCGCCCCGCGCGCTGCTGCGGCCCATGGGCAGCTTCCGCGCGCGCTACTTCCTGGAGGACGATCCGCTCGCCGAGG TGGACGACTACCACCAGGGGCTGGACGCCCTGCTGGAAGCCGGGGACGACGCAGATGCAGAATCTGCGCCCGCGCCGGCC AGCCGGACCTGGGAACGGCTCACGCAGGGCCACGAGGACGAGCATTCGCTGCTCACGCTGTTCCTCTGCCTGGCGGCCGG CGTGCCGCGCAAGACCGTGCTGACCGAGAAGGCCGCCGCGAGCCTGGTGCGCCGCGTGCGCCGGCACGGCTGGCAGCCGG AGCTCGCGGAGGAGTTCATCCGCGCGCATGCGGCCAGCGCGCGCCAGGGCAGCTACCTCGCGCTCTGGAAGTCCTTCGTG GACGAGTCGGCCGCCACGCTGCTCAACCACCGGGACGAGCGCCTGGAAGAGGCGCGCGCGCTGCTGCGCCGCGAATGCCA CGTGGCGGACGGCGTGGACTGA
Upstream 100 bases:
>100_bases GACGGCAAGTTCGAGACCAGCGAGACCGACCGCGGCAAGGCCACGCCGGCCGCGCGCGCGTCCGACGAAGAGTCGGCGAT CTGAGCCGGAGGCCGCCGCG
Downstream 100 bases:
>100_bases ACACGACCGCCGTGCCCCCGCGGCCGGGCAGGCCGCACGGCCTGCAGCAGTGGCTGTATCCGATCCGTTTCGCGACCGGC AACCGGGCCGCGGACCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MSVSDSSPAAGGATALSLHDGRPFFEKALVHGIRHGIVPAERVEAIAADAPKGMVQIARYFGTEFLRPDLERARERMVNL VSLDLLEDSGGDLDRAAQSLREHSFLSRSKAGSDRLRRLIALPQSSNFGFLSTTGEPDVQQLSVWSLRSHAEYRAELERR TGIAAAIGAARWFAERLDLDEGALEAAGAEAEAVVRMGLLWHWMHPAAEAWPHAVSFEKRLSAMRRKGIPAPSRLPLPAG MPAGVAAVADGHVAAVLADAARILDAATAPRALLRPMGSFRARYFLEDDPLAEVDDYHQGLDALLEAGDDADAESAPAPA SRTWERLTQGHEDEHSLLTLFLCLAAGVPRKTVLTEKAAASLVRRVRRHGWQPELAEEFIRAHAASARQGSYLALWKSFV DESAATLLNHRDERLEEARALLRRECHVADGVD
Sequences:
>Translated_433_residues MSVSDSSPAAGGATALSLHDGRPFFEKALVHGIRHGIVPAERVEAIAADAPKGMVQIARYFGTEFLRPDLERARERMVNL VSLDLLEDSGGDLDRAAQSLREHSFLSRSKAGSDRLRRLIALPQSSNFGFLSTTGEPDVQQLSVWSLRSHAEYRAELERR TGIAAAIGAARWFAERLDLDEGALEAAGAEAEAVVRMGLLWHWMHPAAEAWPHAVSFEKRLSAMRRKGIPAPSRLPLPAG MPAGVAAVADGHVAAVLADAARILDAATAPRALLRPMGSFRARYFLEDDPLAEVDDYHQGLDALLEAGDDADAESAPAPA SRTWERLTQGHEDEHSLLTLFLCLAAGVPRKTVLTEKAAASLVRRVRRHGWQPELAEEFIRAHAASARQGSYLALWKSFV DESAATLLNHRDERLEEARALLRRECHVADGVD >Mature_432_residues SVSDSSPAAGGATALSLHDGRPFFEKALVHGIRHGIVPAERVEAIAADAPKGMVQIARYFGTEFLRPDLERARERMVNLV SLDLLEDSGGDLDRAAQSLREHSFLSRSKAGSDRLRRLIALPQSSNFGFLSTTGEPDVQQLSVWSLRSHAEYRAELERRT GIAAAIGAARWFAERLDLDEGALEAAGAEAEAVVRMGLLWHWMHPAAEAWPHAVSFEKRLSAMRRKGIPAPSRLPLPAGM PAGVAAVADGHVAAVLADAARILDAATAPRALLRPMGSFRARYFLEDDPLAEVDDYHQGLDALLEAGDDADAESAPAPAS RTWERLTQGHEDEHSLLTLFLCLAAGVPRKTVLTEKAAASLVRRVRRHGWQPELAEEFIRAHAASARQGSYLALWKSFVD ESAATLLNHRDERLEEARALLRRECHVADGVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47215; Mature: 47084
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSDSSPAAGGATALSLHDGRPFFEKALVHGIRHGIVPAERVEAIAADAPKGMVQIARY CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHH FGTEFLRPDLERARERMVNLVSLDLLEDSGGDLDRAAQSLREHSFLSRSKAGSDRLRRLI HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH ALPQSSNFGFLSTTGEPDVQQLSVWSLRSHAEYRAELERRTGIAAAIGAARWFAERLDLD HCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EGALEAAGAEAEAVVRMGLLWHWMHPAAEAWPHAVSFEKRLSAMRRKGIPAPSRLPLPAG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC MPAGVAAVADGHVAAVLADAARILDAATAPRALLRPMGSFRARYFLEDDPLAEVDDYHQG CCCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHH LDALLEAGDDADAESAPAPASRTWERLTQGHEDEHSLLTLFLCLAAGVPRKTVLTEKAAA HHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH SLVRRVRRHGWQPELAEEFIRAHAASARQGSYLALWKSFVDESAATLLNHRDERLEEARA HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRRECHVADGVD HHHHHHHHCCCCC >Mature Secondary Structure SVSDSSPAAGGATALSLHDGRPFFEKALVHGIRHGIVPAERVEAIAADAPKGMVQIARY CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHH FGTEFLRPDLERARERMVNLVSLDLLEDSGGDLDRAAQSLREHSFLSRSKAGSDRLRRLI HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH ALPQSSNFGFLSTTGEPDVQQLSVWSLRSHAEYRAELERRTGIAAAIGAARWFAERLDLD HCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EGALEAAGAEAEAVVRMGLLWHWMHPAAEAWPHAVSFEKRLSAMRRKGIPAPSRLPLPAG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC MPAGVAAVADGHVAAVLADAARILDAATAPRALLRPMGSFRARYFLEDDPLAEVDDYHQG CCCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHH LDALLEAGDDADAESAPAPASRTWERLTQGHEDEHSLLTLFLCLAAGVPRKTVLTEKAAA HHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH SLVRRVRRHGWQPELAEEFIRAHAASARQGSYLALWKSFVDESAATLLNHRDERLEEARA HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRRECHVADGVD HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA