Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is blh [H]
Identifier: 120611863
GI number: 120611863
Start: 3533988
End: 3534860
Strand: Reverse
Name: blh [H]
Synonym: Aave_3205
Alternate gene names: 120611863
Gene position: 3534860-3533988 (Counterclockwise)
Preceding gene: 120611865
Following gene: 120611861
Centisome position: 66.04
GC content: 70.22
Gene sequence:
>873_bases ATGCCCCTTTCCGTCCAGCATTTTTTCGACAGCGCCACCTCCACGTTCTCGTACGTGGTGGACGACGGCGCCGGCCATTG CGCGGTCATCGATCCCGTCATGGGGTTCGACCAGAAGGCAGGGCGCACCGACCCCGGGCCCGCCGAGGCCCTGGCCGCCC ACATCGCGGCCAAGGGGTTGCGGGTGGACTGGCTGCTCGAAACCCACGCCCATGCGGACCATCTCTCGGCGGCGCCCTGG CTCCAGAAGCGCTTCGGCGGGCTGGTGGGCATCGGCGCCGGAATCACGCAGGTCCAGCGGGAATTCCGCGGCATCTTCAA CGCGACCGACCTGCCCACCGACGGCTCGCAGTTCGGCCACCTGTTCGCCGATGGCGAGACGTTTTCCATCGGGCGCCTGC AGGCCGCCGCCCTGCACGTGCCCGGCCACACCCCCGCCGACGTCGCCTACCGGATCACCGATCCCGCCGCGGGGCCCGAT GCGGTCTTCGTGGGGGATACGCTGTTCATGCCCGACGTCGGCACCGCGCGCTGCGACTTTCCCGGCGGCGATGCCCGCAC GCTGTTCCAGTCGGTGCGGCGCATCCTGGCGCTGCCGGCCGAGACGCTGCTCTATCTCTGCCACGACTATCCGCCCGCGG GGCGGCAGGCCCAGTGCCGCACGACCGTCGCGCGGCAGCGGGCATCGAACATCCATGTGCGCGACGGCATCGCCGCGCAT GACTTCGTCGCGATGCGCACCGAGCGCGATGCGACGCTGAACCTTCCGGCGCTCATGCTGCCCGCGGTCCAGGTGAACAT CCGGGCGGGCCATATGCCCCCCCCCCGAAGCGAACGGCACGGCCTACCTGAAGATCCGGTCAACCTGCTCTGA
Upstream 100 bases:
>100_bases TTCCGGCAGGGGAGATGGGGTGTGCATGGAGTCTCCGGATGTTTTATTGAATGAAATATCTTTCATTGTATAAAATATTG CTTCCCAACGAGGAAGCGCC
Downstream 100 bases:
>100_bases TCCACCCGGCTGCGGGGCGGCCGCCGCGCTGTCCCGGGCGCGGCGCACGCGCGCCGGTGCTCCTAGCGCTTGCGTCCGCC GAACACGCTGCCCAGCACCC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MPLSVQHFFDSATSTFSYVVDDGAGHCAVIDPVMGFDQKAGRTDPGPAEALAAHIAAKGLRVDWLLETHAHADHLSAAPW LQKRFGGLVGIGAGITQVQREFRGIFNATDLPTDGSQFGHLFADGETFSIGRLQAAALHVPGHTPADVAYRITDPAAGPD AVFVGDTLFMPDVGTARCDFPGGDARTLFQSVRRILALPAETLLYLCHDYPPAGRQAQCRTTVARQRASNIHVRDGIAAH DFVAMRTERDATLNLPALMLPAVQVNIRAGHMPPPRSERHGLPEDPVNLL
Sequences:
>Translated_290_residues MPLSVQHFFDSATSTFSYVVDDGAGHCAVIDPVMGFDQKAGRTDPGPAEALAAHIAAKGLRVDWLLETHAHADHLSAAPW LQKRFGGLVGIGAGITQVQREFRGIFNATDLPTDGSQFGHLFADGETFSIGRLQAAALHVPGHTPADVAYRITDPAAGPD AVFVGDTLFMPDVGTARCDFPGGDARTLFQSVRRILALPAETLLYLCHDYPPAGRQAQCRTTVARQRASNIHVRDGIAAH DFVAMRTERDATLNLPALMLPAVQVNIRAGHMPPPRSERHGLPEDPVNLL >Mature_289_residues PLSVQHFFDSATSTFSYVVDDGAGHCAVIDPVMGFDQKAGRTDPGPAEALAAHIAAKGLRVDWLLETHAHADHLSAAPWL QKRFGGLVGIGAGITQVQREFRGIFNATDLPTDGSQFGHLFADGETFSIGRLQAAALHVPGHTPADVAYRITDPAAGPDA VFVGDTLFMPDVGTARCDFPGGDARTLFQSVRRILALPAETLLYLCHDYPPAGRQAQCRTTVARQRASNIHVRDGIAAHD FVAMRTERDATLNLPALMLPAVQVNIRAGHMPPPRSERHGLPEDPVNLL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=277, Percent_Identity=28.158844765343, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI116642887, Length=200, Percent_Identity=28.5, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI21703352, Length=200, Percent_Identity=28.5, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1787158, Length=199, Percent_Identity=29.1457286432161, Blast_Score=63, Evalue=3e-11, Organism=Drosophila melanogaster, GI221330176, Length=253, Percent_Identity=28.0632411067194, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 31147; Mature: 31015
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSVQHFFDSATSTFSYVVDDGAGHCAVIDPVMGFDQKAGRTDPGPAEALAAHIAAKGL CCCCHHHHHCCHHCEEEEEEECCCCCEEEECCHHCCCCCCCCCCCCHHHHHHHHHHHCCC RVDWLLETHAHADHLSAAPWLQKRFGGLVGIGAGITQVQREFRGIFNATDLPTDGSQFGH EEEEEEECCCCHHHCCCCHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCCCCHHCCE LFADGETFSIGRLQAAALHVPGHTPADVAYRITDPAAGPDAVFVGDTLFMPDVGTARCDF EEECCCEEECCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEECCEEECCCCCCCCCCC PGGDARTLFQSVRRILALPAETLLYLCHDYPPAGRQAQCRTTVARQRASNIHVRDGIAAH CCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEECCCCCHH DFVAMRTERDATLNLPALMLPAVQVNIRAGHMPPPRSERHGLPEDPVNLL HEEEEECCCCCEECCCHHEECEEEEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PLSVQHFFDSATSTFSYVVDDGAGHCAVIDPVMGFDQKAGRTDPGPAEALAAHIAAKGL CCCHHHHHCCHHCEEEEEEECCCCCEEEECCHHCCCCCCCCCCCCHHHHHHHHHHHCCC RVDWLLETHAHADHLSAAPWLQKRFGGLVGIGAGITQVQREFRGIFNATDLPTDGSQFGH EEEEEEECCCCHHHCCCCHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCCCCHHCCE LFADGETFSIGRLQAAALHVPGHTPADVAYRITDPAAGPDAVFVGDTLFMPDVGTARCDF EEECCCEEECCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEECCEEECCCCCCCCCCC PGGDARTLFQSVRRILALPAETLLYLCHDYPPAGRQAQCRTTVARQRASNIHVRDGIAAH CCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEECCCCCHH DFVAMRTERDATLNLPALMLPAVQVNIRAGHMPPPRSERHGLPEDPVNLL HEEEEECCCCCEECCCHHEECEEEEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]