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The map label for this gene is xpsE [H]

Identifier: 120611383

GI number: 120611383

Start: 2985165

End: 2986115

Strand: Reverse

Name: xpsE [H]

Synonym: Aave_2719

Alternate gene names: 120611383

Gene position: 2986115-2985165 (Counterclockwise)

Preceding gene: 120611384

Following gene: 120611382

Centisome position: 55.79

GC content: 65.09

Gene sequence:

>951_bases
ATGGACAGCACCGTCAAACCCTTCCTCGACGCGATCACCGACGTGCGCGCCAGCATCAACGAGCCAGGCCGGAGCCTGCA
GTTCCCTGGACCCGTCGTCCTGCAGCCCGAAATCCAGCCGTATGTGGCCGGGCTGCTCAAGCACTTCATGGAACTTCAAG
CCGTGGACGCGACCTTGCACCATGAAGGCCTGGTTTGGCGTGGCCACCTGGACCGCAGCGTGGTGGACGGGCCATGGGTC
AACTTCCGCAAAATGCCCGAGCAGCCGCCGACCCTGGACACGCTGCCATCCCCCTTGCCAACCGTAATTCGCGAGTGGCT
CCTGAAGCCTTCACACAGCGAAGGGGGCCTGATGCTGGTGGCCGGCCCCACGGGGGCAGGGAAGACGACGACGGCGTCTG
CGACCGTCATATCGCGCCTCAAGGAGCTCGGCGGTTTCGCTACGACCGTCGAGCAGCCGCCGGAGCAGCCGCTCAACGGC
TGGCACCATGGGGCCACAAAAAAAGGCTATTGCTCCCAGGCCTGGGTGAAGATCGAAGGCGAAAGTCCGTGGGCCGCGGC
GCTCACCGGAGTGCTCCGCTCCCAGGCGGCCGGCACGCCGACGATGCTCTTCGTCGGTGAGATCCGAGAGGCCGAGGCCG
CCCGGGTCGCGCTGCAGGCCGCGGGCAACGGGTTCCTGGTCATCTGCACTTCCTTCGCCACGGACACGGTGTCCGCCGTG
AGTTCCTTTGCGAAGTGCCTGGACGAAAGCCAGCAGGAGATGTTCTCTCTGCTCCTGCGAGGTGTCGTGTTTCAGAAGCT
CGACGGCAAGCTCCTCACGGCCAAGCTGCTGGAATCCACGTTGGCCGTGCAGCAGGCGATCGCCGCTGCAAAGTACGCAT
CGCTCGAAGGCGAGGCTCAGCGCCAGGCCAATGAGCGGATGCTTCTCAGCACCAGGTTCGCCACGCATTGA

Upstream 100 bases:

>100_bases
GCTGCTCTGAGCCGTCGCCGAAGATCGCAGCGCAATTCCGCTGACCTCTCCTCTCGCGCCGCCCGCACGGGCGGTGCATG
ACGCAACCACCGGGCTCGCC

Downstream 100 bases:

>100_bases
TCATGTGGATCCTCCTTCCAGCCATCTTCTTGACCTGCCTGCTGACAGCCTTCATCGGCGCACGGGGAGACGCCGGCGCA
TCCGAGATCCGCACCCGCGC

Product: type II secretion system protein E

Products: NA

Alternate protein names: Type II traffic warden ATPase [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MDSTVKPFLDAITDVRASINEPGRSLQFPGPVVLQPEIQPYVAGLLKHFMELQAVDATLHHEGLVWRGHLDRSVVDGPWV
NFRKMPEQPPTLDTLPSPLPTVIREWLLKPSHSEGGLMLVAGPTGAGKTTTASATVISRLKELGGFATTVEQPPEQPLNG
WHHGATKKGYCSQAWVKIEGESPWAAALTGVLRSQAAGTPTMLFVGEIREAEAARVALQAAGNGFLVICTSFATDTVSAV
SSFAKCLDESQQEMFSLLLRGVVFQKLDGKLLTAKLLESTLAVQQAIAAAKYASLEGEAQRQANERMLLSTRFATH

Sequences:

>Translated_316_residues
MDSTVKPFLDAITDVRASINEPGRSLQFPGPVVLQPEIQPYVAGLLKHFMELQAVDATLHHEGLVWRGHLDRSVVDGPWV
NFRKMPEQPPTLDTLPSPLPTVIREWLLKPSHSEGGLMLVAGPTGAGKTTTASATVISRLKELGGFATTVEQPPEQPLNG
WHHGATKKGYCSQAWVKIEGESPWAAALTGVLRSQAAGTPTMLFVGEIREAEAARVALQAAGNGFLVICTSFATDTVSAV
SSFAKCLDESQQEMFSLLLRGVVFQKLDGKLLTAKLLESTLAVQQAIAAAKYASLEGEAQRQANERMLLSTRFATH
>Mature_316_residues
MDSTVKPFLDAITDVRASINEPGRSLQFPGPVVLQPEIQPYVAGLLKHFMELQAVDATLHHEGLVWRGHLDRSVVDGPWV
NFRKMPEQPPTLDTLPSPLPTVIREWLLKPSHSEGGLMLVAGPTGAGKTTTASATVISRLKELGGFATTVEQPPEQPLNG
WHHGATKKGYCSQAWVKIEGESPWAAALTGVLRSQAAGTPTMLFVGEIREAEAARVALQAAGNGFLVICTSFATDTVSAV
SSFAKCLDESQQEMFSLLLRGVVFQKLDGKLLTAKLLESTLAVQQAIAAAKYASLEGEAQRQANERMLLSTRFATH

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG2805

COG function: function code NU; Tfp pilus assembly protein, pilus retraction ATPase PilT

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=167, Percent_Identity=33.5329341317365, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI87082188, Length=228, Percent_Identity=30.2631578947368, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR007831
- InterPro:   IPR013369
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E; PF05157 GSPII_E_N [H]

EC number: NA

Molecular weight: Translated: 34075; Mature: 34075

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSTVKPFLDAITDVRASINEPGRSLQFPGPVVLQPEIQPYVAGLLKHFMELQAVDATLH
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
HEGLVWRGHLDRSVVDGPWVNFRKMPEQPPTLDTLPSPLPTVIREWLLKPSHSEGGLMLV
CCCEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEE
AGPTGAGKTTTASATVISRLKELGGFATTVEQPPEQPLNGWHHGATKKGYCSQAWVKIEG
ECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
ESPWAAALTGVLRSQAAGTPTMLFVGEIREAEAARVALQAAGNGFLVICTSFATDTVSAV
CCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHH
SSFAKCLDESQQEMFSLLLRGVVFQKLDGKLLTAKLLESTLAVQQAIAAAKYASLEGEAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RQANERMLLSTRFATH
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDSTVKPFLDAITDVRASINEPGRSLQFPGPVVLQPEIQPYVAGLLKHFMELQAVDATLH
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
HEGLVWRGHLDRSVVDGPWVNFRKMPEQPPTLDTLPSPLPTVIREWLLKPSHSEGGLMLV
CCCEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEE
AGPTGAGKTTTASATVISRLKELGGFATTVEQPPEQPLNGWHHGATKKGYCSQAWVKIEG
ECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
ESPWAAALTGVLRSQAAGTPTMLFVGEIREAEAARVALQAAGNGFLVICTSFATDTVSAV
CCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHH
SSFAKCLDESQQEMFSLLLRGVVFQKLDGKLLTAKLLESTLAVQQAIAAAKYASLEGEAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RQANERMLLSTRFATH
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1944223; 12024217 [H]