| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is yhjG [H]
Identifier: 120611341
GI number: 120611341
Start: 2936933
End: 2939221
Strand: Reverse
Name: yhjG [H]
Synonym: Aave_2673
Alternate gene names: 120611341
Gene position: 2939221-2936933 (Counterclockwise)
Preceding gene: 120611358
Following gene: 120611336
Centisome position: 54.91
GC content: 71.52
Gene sequence:
>2289_bases ATGCGCCCTTCCGCCCTGCTCCCCTCCCACCGTTTCCACGCGGCACGCCGGCAGCACGGGCGCGCCCTCAACTGGCTGCT GGGCCTGCTGGGCGCACTGGTCGTCCTGGCGCTGATCGCCCTCGTGATCCTGCTCACCTTCGACTGGAACCGCGCCCGCC CCTGGATCAACGAGCGCGTGAGCGCGGCGACCGGGCGGCATTTCGCGATCGAGGGCGATCTCTCGGCCCGCTGGCACTGG CCGCAGCCGGTGGACATGGAAACCGGCTGGCGGCGCTGGGTGCCCGGCCTCACCGTGCAGGCGGATCGCATGGTGCTGGG CAACCGTACGGATTTCGGGCGCTATGGCGCGGTGGGCATGGACGCGGACAATGCCGACGCCCGGGTGGTGGAACGCCGCG CTGCCGCGGCTTCTGCGGCTGCATCGGCCCCCGGGGTGCCTGCTTCGCCCTCGGCAGCGCCCGCATCGGTGCCAGCGTCG GCAGCCAGCGCTCCCGAGGCCGCCCGGGGCGCCGGGTCCGGGTCCGCGCCCCCTCCTCCCATGGCCACGGTGGGCAGTGC TACGGCGTCCCTCAAGCTGCTGCCGCTGCTGGTGCGGCATGTGTCCGTCGGTACGCTGTCCATCCAGGCACCCGACGTGG CGCTCGCGCGGCGTGCAGACGGCAGCAACAACTGGACCTTCGACCGCCCTGCTCCCGACGGCAGCGCCAGCCCTAACCCC TGGACGGTGAACGTGGCCCGGCTGGTGGTCAACGATGGCCGGCTGGCGATGGCGGACGCCCAGAAGGACCTGGCTTTCGT CGCGCACCTGGCGACCCAAAGCCAGCCCGGCCCCTACGGCGTGCGCTTCGATGTGCGCGGGCGCTATGCCAGGGCCCGCA TCGAAGGCAGCGGCCAGGCGGGCAACGCACTGTCGCTGCGGCAGCAGGACGTGCAGTACCCCCTGCAGTTCAAGGCACGC GCCGGCACGGTGCGGGCCGAGGTGGAGGGCACGCTGGCCAACCCGCTGGCGCTCGCCGGCATGGACCTGCAGGTGCTGCT GCAGGCCGAGAGCATGGCCGACCTGTATCCGCTCACCGGCATCGTGCTGCCGAATACGCCCCCCTTCCGCACCAAGGGCC ACCTGGTCGGCAGCCTGGAGCCGGGCCGCGCGGTGTGGGATTACCGGGACTTCACCGGCACGGTGGGCCAGAGCGACCTG CGCGGCCAGCTCACCTACACCTCCGGCCAGCCGCGCCCGCGCCTCACGGGCGAGATGGCGTCGCGGCAGTTGCGCCTGGC CGACCTGGGGCCGGTGGTCGGCGCGCCGTCCGGCGAGCGGCCGCAGGAGAAAGGCACGTCCAGGCGCGCGGGCAAGGTGC TGCCCGACGCCGCCTTCGCCACCGACCGCTGGAACGCCATGGACCTGGACCTGAAGTTCAAGGGCGAGCGCATCGTGCGC GACGAAAGCCTGCCCATCGAGAACCTGGACGTGCATGCCCGCATGGACAACGCGCAGCTCACGCTCTCGCCCCTGCGCTT CGGCGTGGCACAGGGCAAGATCGATTCCAACGTGGTGCTCGACGGCCGCGAGGCGCCGCTCAAGGCCCGGCTGCGCGGCA GCGTGGACGGACTGCGCCTGTCGGCCCTCTTCCCCAAGGTCGAGCTCATGGAAAAGAGCTTCGGCCGGCTCGACGGCGCC ATGGCGGTGAACGGCACGGGCAATTCGATCGCGAAGATGCTGGGCACCAGCAACGGCGAGGCGCGCGTCTATATCCGCGA CGGCCGTTTCAGCAAGCAGATGCTGGATCTGGCGGCGCTCAACGTGGGCAGCGTGGTCGTGGCCAAGCTCTTCGGCGAGA ACAAGGAAGTGCAGCTGCGCTGCGCCGTGGCGGATTTCGGCATCAAGGACGGGATCGCGCAGACGCGCTCGGTGAAGCTC AACACCGAAGAGGCCGTGGTGGAGGCCATGGGCACGATCGACCTGGGCCGCGAGTACATGGACCTCTACATCAAGCCCGA GTCACTGAAATGGAAGTTTTTCTCGCTGCGCACGCCGCTCTACGTGCGCGGCCATTTCGCGGACCCGAAGGTCGGCGTGG AAGCCGGCCCGCTGCTGTTGCGCGCGGGCGCCGCTGTCGCCGCCGCGGCCGTGGCCCCGGTGGCGCTGGCCCTGGTGCCG GTCACCGTGCCGGCCGCGGAGGACGACGAGAACTGCGCCGCCCTGCTCTCCCATGCCGACCGCGACGTGCAGGCCGGCAA GGCGGGGGCAACGCCCAGGCCGGCGGCATCGGCTCCTGCCCGGCGCTGA
Upstream 100 bases:
>100_bases GCGCGTGGCACATGGGATGCCTGCCGTCGCAGGGGCGGCCCGGCGCACACTAGGATCGGACGCAGCTGTTGCCATCCCGA TCCACGCTCCGTTGCCATCC
Downstream 100 bases:
>100_bases TCTAGTGGAAATCCCGGCTGCCCTCCAGCGCGGGGGCGAGCCGGCCGAGCAGCGGGGTCAGGTCCTTGCAGCGCTGCAGC ACCAGGTGGCGCACCACGGC
Product: AsmA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 762; Mature: 762
Protein sequence:
>762_residues MRPSALLPSHRFHAARRQHGRALNWLLGLLGALVVLALIALVILLTFDWNRARPWINERVSAATGRHFAIEGDLSARWHW PQPVDMETGWRRWVPGLTVQADRMVLGNRTDFGRYGAVGMDADNADARVVERRAAAASAAASAPGVPASPSAAPASVPAS AASAPEAARGAGSGSAPPPPMATVGSATASLKLLPLLVRHVSVGTLSIQAPDVALARRADGSNNWTFDRPAPDGSASPNP WTVNVARLVVNDGRLAMADAQKDLAFVAHLATQSQPGPYGVRFDVRGRYARARIEGSGQAGNALSLRQQDVQYPLQFKAR AGTVRAEVEGTLANPLALAGMDLQVLLQAESMADLYPLTGIVLPNTPPFRTKGHLVGSLEPGRAVWDYRDFTGTVGQSDL RGQLTYTSGQPRPRLTGEMASRQLRLADLGPVVGAPSGERPQEKGTSRRAGKVLPDAAFATDRWNAMDLDLKFKGERIVR DESLPIENLDVHARMDNAQLTLSPLRFGVAQGKIDSNVVLDGREAPLKARLRGSVDGLRLSALFPKVELMEKSFGRLDGA MAVNGTGNSIAKMLGTSNGEARVYIRDGRFSKQMLDLAALNVGSVVVAKLFGENKEVQLRCAVADFGIKDGIAQTRSVKL NTEEAVVEAMGTIDLGREYMDLYIKPESLKWKFFSLRTPLYVRGHFADPKVGVEAGPLLLRAGAAVAAAAVAPVALALVP VTVPAAEDDENCAALLSHADRDVQAGKAGATPRPAASAPARR
Sequences:
>Translated_762_residues MRPSALLPSHRFHAARRQHGRALNWLLGLLGALVVLALIALVILLTFDWNRARPWINERVSAATGRHFAIEGDLSARWHW PQPVDMETGWRRWVPGLTVQADRMVLGNRTDFGRYGAVGMDADNADARVVERRAAAASAAASAPGVPASPSAAPASVPAS AASAPEAARGAGSGSAPPPPMATVGSATASLKLLPLLVRHVSVGTLSIQAPDVALARRADGSNNWTFDRPAPDGSASPNP WTVNVARLVVNDGRLAMADAQKDLAFVAHLATQSQPGPYGVRFDVRGRYARARIEGSGQAGNALSLRQQDVQYPLQFKAR AGTVRAEVEGTLANPLALAGMDLQVLLQAESMADLYPLTGIVLPNTPPFRTKGHLVGSLEPGRAVWDYRDFTGTVGQSDL RGQLTYTSGQPRPRLTGEMASRQLRLADLGPVVGAPSGERPQEKGTSRRAGKVLPDAAFATDRWNAMDLDLKFKGERIVR DESLPIENLDVHARMDNAQLTLSPLRFGVAQGKIDSNVVLDGREAPLKARLRGSVDGLRLSALFPKVELMEKSFGRLDGA MAVNGTGNSIAKMLGTSNGEARVYIRDGRFSKQMLDLAALNVGSVVVAKLFGENKEVQLRCAVADFGIKDGIAQTRSVKL NTEEAVVEAMGTIDLGREYMDLYIKPESLKWKFFSLRTPLYVRGHFADPKVGVEAGPLLLRAGAAVAAAAVAPVALALVP VTVPAAEDDENCAALLSHADRDVQAGKAGATPRPAASAPARR >Mature_762_residues MRPSALLPSHRFHAARRQHGRALNWLLGLLGALVVLALIALVILLTFDWNRARPWINERVSAATGRHFAIEGDLSARWHW PQPVDMETGWRRWVPGLTVQADRMVLGNRTDFGRYGAVGMDADNADARVVERRAAAASAAASAPGVPASPSAAPASVPAS AASAPEAARGAGSGSAPPPPMATVGSATASLKLLPLLVRHVSVGTLSIQAPDVALARRADGSNNWTFDRPAPDGSASPNP WTVNVARLVVNDGRLAMADAQKDLAFVAHLATQSQPGPYGVRFDVRGRYARARIEGSGQAGNALSLRQQDVQYPLQFKAR AGTVRAEVEGTLANPLALAGMDLQVLLQAESMADLYPLTGIVLPNTPPFRTKGHLVGSLEPGRAVWDYRDFTGTVGQSDL RGQLTYTSGQPRPRLTGEMASRQLRLADLGPVVGAPSGERPQEKGTSRRAGKVLPDAAFATDRWNAMDLDLKFKGERIVR DESLPIENLDVHARMDNAQLTLSPLRFGVAQGKIDSNVVLDGREAPLKARLRGSVDGLRLSALFPKVELMEKSFGRLDGA MAVNGTGNSIAKMLGTSNGEARVYIRDGRFSKQMLDLAALNVGSVVVAKLFGENKEVQLRCAVADFGIKDGIAQTRSVKL NTEEAVVEAMGTIDLGREYMDLYIKPESLKWKFFSLRTPLYVRGHFADPKVGVEAGPLLLRAGAAVAAAAVAPVALALVP VTVPAAEDDENCAALLSHADRDVQAGKAGATPRPAASAPARR
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=596, Percent_Identity=37.4161073825503, Blast_Score=407, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 81157; Mature: 81157
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPSALLPSHRFHAARRQHGRALNWLLGLLGALVVLALIALVILLTFDWNRARPWINERV CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH SAATGRHFAIEGDLSARWHWPQPVDMETGWRRWVPGLTVQADRMVLGNRTDFGRYGAVGM HHCCCCEEEEECCCCEEECCCCCCCCCCCHHHHCCCCEEEECEEEECCCCCCCCCCCEEC DADNADARVVERRAAAASAAASAPGVPASPSAAPASVPASAASAPEAARGAGSGSAPPPP CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC MATVGSATASLKLLPLLVRHVSVGTLSIQAPDVALARRADGSNNWTFDRPAPDGSASPNP CCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCEECCCCCCCCCCCCC WTVNVARLVVNDGRLAMADAQKDLAFVAHLATQSQPGPYGVRFDVRGRYARARIEGSGQA EEEEEEEEEEECCCEEEECCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCC GNALSLRQQDVQYPLQFKARAGTVRAEVEGTLANPLALAGMDLQVLLQAESMADLYPLTG CCEEHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCEECCCCEEEEEEHHHHHHHCCCCE IVLPNTPPFRTKGHLVGSLEPGRAVWDYRDFTGTVGQSDLRGQLTYTSGQPRPRLTGEMA EECCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHH SRQLRLADLGPVVGAPSGERPQEKGTSRRAGKVLPDAAFATDRWNAMDLDLKFKGERIVR HCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHCCCCCCEEEEEEEECCCEEEE DESLPIENLDVHARMDNAQLTLSPLRFGVAQGKIDSNVVLDGREAPLKARLRGSVDGLRL CCCCCCCCCEEEEEECCCEEEEHHHHHHHHCCCCCCCEEECCCCCCCHHHHCCCCCCEEE SALFPKVELMEKSFGRLDGAMAVNGTGNSIAKMLGTSNGEARVYIRDGRFSKQMLDLAAL EHHCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHH NVGSVVVAKLFGENKEVQLRCAVADFGIKDGIAQTRSVKLNTEEAVVEAMGTIDLGREYM CHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCEE DLYIKPESLKWKFFSLRTPLYVRGHFADPKVGVEAGPLLLRAGAAVAAAAVAPVALALVP EEEECCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHEEE VTVPAAEDDENCAALLSHADRDVQAGKAGATPRPAASAPARR EEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRPSALLPSHRFHAARRQHGRALNWLLGLLGALVVLALIALVILLTFDWNRARPWINERV CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH SAATGRHFAIEGDLSARWHWPQPVDMETGWRRWVPGLTVQADRMVLGNRTDFGRYGAVGM HHCCCCEEEEECCCCEEECCCCCCCCCCCHHHHCCCCEEEECEEEECCCCCCCCCCCEEC DADNADARVVERRAAAASAAASAPGVPASPSAAPASVPASAASAPEAARGAGSGSAPPPP CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC MATVGSATASLKLLPLLVRHVSVGTLSIQAPDVALARRADGSNNWTFDRPAPDGSASPNP CCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCEECCCCCCCCCCCCC WTVNVARLVVNDGRLAMADAQKDLAFVAHLATQSQPGPYGVRFDVRGRYARARIEGSGQA EEEEEEEEEEECCCEEEECCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCC GNALSLRQQDVQYPLQFKARAGTVRAEVEGTLANPLALAGMDLQVLLQAESMADLYPLTG CCEEHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCEECCCCEEEEEEHHHHHHHCCCCE IVLPNTPPFRTKGHLVGSLEPGRAVWDYRDFTGTVGQSDLRGQLTYTSGQPRPRLTGEMA EECCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHH SRQLRLADLGPVVGAPSGERPQEKGTSRRAGKVLPDAAFATDRWNAMDLDLKFKGERIVR HCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHCCCCCCEEEEEEEECCCEEEE DESLPIENLDVHARMDNAQLTLSPLRFGVAQGKIDSNVVLDGREAPLKARLRGSVDGLRL CCCCCCCCCEEEEEECCCEEEEHHHHHHHHCCCCCCCEEECCCCCCCHHHHCCCCCCEEE SALFPKVELMEKSFGRLDGAMAVNGTGNSIAKMLGTSNGEARVYIRDGRFSKQMLDLAAL EHHCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHH NVGSVVVAKLFGENKEVQLRCAVADFGIKDGIAQTRSVKLNTEEAVVEAMGTIDLGREYM CHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCEE DLYIKPESLKWKFFSLRTPLYVRGHFADPKVGVEAGPLLLRAGAAVAAAAVAPVALALVP EEEECCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHEEE VTVPAAEDDENCAALLSHADRDVQAGKAGATPRPAASAPARR EEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]