| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is phoR [H]
Identifier: 120611300
GI number: 120611300
Start: 2885256
End: 2886620
Strand: Direct
Name: phoR [H]
Synonym: Aave_2632
Alternate gene names: 120611300
Gene position: 2885256-2886620 (Clockwise)
Preceding gene: 120611299
Following gene: 120611304
Centisome position: 53.9
GC content: 69.89
Gene sequence:
>1365_bases ATGGTTTCGCGTTGCATCTTCTTCCTGTCCTTCCAGGTCGTCGGCCTCCTGCTCGGCTGGCTCTGGGGGGGCTTCCACGG CGCGGTGGCGACCGTTTTCGCGGGCGTCTGGCTCTGGTTCCTCTGGGACCTCTGGCGCGGTTCCCGCGTACTGCGCTGGC TGCGCGACGGCGACCTCGCCAGCTCTCCCTCGCTCAGGGGGCTCTGGGGCGAGGCCGCCGACAGGTTCCGCCGCCTGCTG CGCCAGAACCAGGCCGACATCGCCGCGAGCGATGCGCGGCTGCAGGAGATCCTCGCGGCCCTGCAGGCGACGCCCAATGG CGTGGTGCTGCTCGACGCCGAGGGACACATCGAGTGGTGCAACCAGATCGCGGTGACGCAGTTCGGTCTGGATGCCGCGC GCGACATGGGCCAGTCGATCGGCAACCTGCTGCGCGACCCCGAGTTCAGCGCCTACTACGCCGCCCAGGATTTCTCCAGG GATGTCGTCCTGCAAGGACGCGAGAGCACGCCCTCCCGGCCGGTGCGCATTTCCGTGCACCTGCATCCTTACGGCGACGG CCGCAAGCTGCTGCTCTCGCGGGACGTGACGGCGCTGGAGCAGGCCGAGGCCATGCGCCGCGATTTCGTGGCCAACGTAT CGCACGAGATCCGCACTCCGCTCACGGTCCTCATGGGGTTCGTGGAAACCCTGCAGACGCTGCCTCTGTCGTCCGAGGAG CGCGCGCGCTACCTGAACATGATGTCGCAGCAGGCCGGCCGGATGCAAAGCGTGGTGCAGGACCTGCTGACCCTGTCGCG CCTGGAGGGCAGCCCCCCGCCCGGGCTGACCGAATGCACGCCGGTGGATGCGCTGCTGCGCCGCTGCGAGGACGAGGCGC GCGGCCTGTCCGCGCTGCTCACCCGCAGCCAGTCGGCGGGCCATGTGCTGGAGTTTCCGCCGGCCGAGGCGCTGCAGGGC GCCGGCCAACTGATCGGGGTGACGGCCGAGCTGCAGAGTGCGCTCGCCAACCTGATCGGCAATGCAGTGCGCTATACGCC CGCCGGCGGCCGGATCACGGTGGCGTGGGAGACGCTGGCCGACGGCAGTGCCCGGTTCTCGGTGAGGGATACGGGCCCCG GCATCGAGTCCGTGCACATTCCGCGGCTGACCGAACGCTTCTACCGCGTGGACCGCAGCCGCTCCCGCGACACCGGCGGC ACCGGGCTGGGCCTGGCCATCGTCAAGCACGTGGTGCAGCGCCATTCGGCGTCGCTGGGCATCGAGAGCACCGTGGGCAA GGGTTCCGTGTTTTCCGTCACGTTCCCGCCGCACCGCATCCAACGCAGTGCCCCGGTACGCGGCGCACCGGCAAAGGCCT GTTGA
Upstream 100 bases:
>100_bases GTCGAGCGGGCCGCCCGCGGGCGGCCTTCCTTTTCGTTATCTGACAACAAGGCAGCGGAGCGCGGACGGGGAGGGGCCCC GCGGAGCCCTCCCGGATTCC
Downstream 100 bases:
>100_bases CAGGCCCTAAGCCCATCCTGCCGGAGCGGGGCGCGGACCCGATGAACGGGCCTTCCGCAAGGCCCTCGCCAGCATCGCAA TGAACAGCGCGGCCGTCAGT
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MVSRCIFFLSFQVVGLLLGWLWGGFHGAVATVFAGVWLWFLWDLWRGSRVLRWLRDGDLASSPSLRGLWGEAADRFRRLL RQNQADIAASDARLQEILAALQATPNGVVLLDAEGHIEWCNQIAVTQFGLDAARDMGQSIGNLLRDPEFSAYYAAQDFSR DVVLQGRESTPSRPVRISVHLHPYGDGRKLLLSRDVTALEQAEAMRRDFVANVSHEIRTPLTVLMGFVETLQTLPLSSEE RARYLNMMSQQAGRMQSVVQDLLTLSRLEGSPPPGLTECTPVDALLRRCEDEARGLSALLTRSQSAGHVLEFPPAEALQG AGQLIGVTAELQSALANLIGNAVRYTPAGGRITVAWETLADGSARFSVRDTGPGIESVHIPRLTERFYRVDRSRSRDTGG TGLGLAIVKHVVQRHSASLGIESTVGKGSVFSVTFPPHRIQRSAPVRGAPAKAC
Sequences:
>Translated_454_residues MVSRCIFFLSFQVVGLLLGWLWGGFHGAVATVFAGVWLWFLWDLWRGSRVLRWLRDGDLASSPSLRGLWGEAADRFRRLL RQNQADIAASDARLQEILAALQATPNGVVLLDAEGHIEWCNQIAVTQFGLDAARDMGQSIGNLLRDPEFSAYYAAQDFSR DVVLQGRESTPSRPVRISVHLHPYGDGRKLLLSRDVTALEQAEAMRRDFVANVSHEIRTPLTVLMGFVETLQTLPLSSEE RARYLNMMSQQAGRMQSVVQDLLTLSRLEGSPPPGLTECTPVDALLRRCEDEARGLSALLTRSQSAGHVLEFPPAEALQG AGQLIGVTAELQSALANLIGNAVRYTPAGGRITVAWETLADGSARFSVRDTGPGIESVHIPRLTERFYRVDRSRSRDTGG TGLGLAIVKHVVQRHSASLGIESTVGKGSVFSVTFPPHRIQRSAPVRGAPAKAC >Mature_454_residues MVSRCIFFLSFQVVGLLLGWLWGGFHGAVATVFAGVWLWFLWDLWRGSRVLRWLRDGDLASSPSLRGLWGEAADRFRRLL RQNQADIAASDARLQEILAALQATPNGVVLLDAEGHIEWCNQIAVTQFGLDAARDMGQSIGNLLRDPEFSAYYAAQDFSR DVVLQGRESTPSRPVRISVHLHPYGDGRKLLLSRDVTALEQAEAMRRDFVANVSHEIRTPLTVLMGFVETLQTLPLSSEE RARYLNMMSQQAGRMQSVVQDLLTLSRLEGSPPPGLTECTPVDALLRRCEDEARGLSALLTRSQSAGHVLEFPPAEALQG AGQLIGVTAELQSALANLIGNAVRYTPAGGRITVAWETLADGSARFSVRDTGPGIESVHIPRLTERFYRVDRSRSRDTGG TGLGLAIVKHVVQRHSASLGIESTVGKGSVFSVTFPPHRIQRSAPVRGAPAKAC
Specific function: Member of the two-component regulatory system phoR/phoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates phoB in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=433, Percent_Identity=39.9538106235566, Blast_Score=286, Evalue=1e-78, Organism=Escherichia coli, GI1786783, Length=238, Percent_Identity=31.5126050420168, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1788393, Length=253, Percent_Identity=33.201581027668, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1789149, Length=235, Percent_Identity=31.9148936170213, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1790346, Length=244, Percent_Identity=31.1475409836066, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI145693157, Length=263, Percent_Identity=29.277566539924, Blast_Score=95, Evalue=8e-21, Organism=Escherichia coli, GI48994928, Length=252, Percent_Identity=29.3650793650794, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1790861, Length=233, Percent_Identity=32.1888412017167, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1788713, Length=251, Percent_Identity=25.0996015936255, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1788549, Length=356, Percent_Identity=24.1573033707865, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1789403, Length=213, Percent_Identity=29.5774647887324, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1786912, Length=251, Percent_Identity=29.4820717131474, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1790551, Length=236, Percent_Identity=31.3559322033898, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1790436, Length=265, Percent_Identity=26.0377358490566, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI87081816, Length=241, Percent_Identity=26.5560165975104, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR021766 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR014310 [H]
Pfam domain/function: PF11808 DUF3329; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49681; Mature: 49681
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRCIFFLSFQVVGLLLGWLWGGFHGAVATVFAGVWLWFLWDLWRGSRVLRWLRDGDLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSPSLRGLWGEAADRFRRLLRQNQADIAASDARLQEILAALQATPNGVVLLDAEGHIEWC CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH NQIAVTQFGLDAARDMGQSIGNLLRDPEFSAYYAAQDFSRDVVLQGRESTPSRPVRISVH HHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCEEECCCCCCCCCEEEEEE LHPYGDGRKLLLSRDVTALEQAEAMRRDFVANVSHEIRTPLTVLMGFVETLQTLPLSSEE EEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RARYLNMMSQQAGRMQSVVQDLLTLSRLEGSPPPGLTECTPVDALLRRCEDEARGLSALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TRSQSAGHVLEFPPAEALQGAGQLIGVTAELQSALANLIGNAVRYTPAGGRITVAWETLA HCCCCCCCEEECCCHHHHHCCCCEEEHHHHHHHHHHHHHCCCEEECCCCCEEEEEEEECC DGSARFSVRDTGPGIESVHIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHVVQRHSASLG CCCCEEEEECCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC IESTVGKGSVFSVTFPPHRIQRSAPVRGAPAKAC CCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MVSRCIFFLSFQVVGLLLGWLWGGFHGAVATVFAGVWLWFLWDLWRGSRVLRWLRDGDLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSPSLRGLWGEAADRFRRLLRQNQADIAASDARLQEILAALQATPNGVVLLDAEGHIEWC CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH NQIAVTQFGLDAARDMGQSIGNLLRDPEFSAYYAAQDFSRDVVLQGRESTPSRPVRISVH HHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCEEECCCCCCCCCEEEEEE LHPYGDGRKLLLSRDVTALEQAEAMRRDFVANVSHEIRTPLTVLMGFVETLQTLPLSSEE EEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RARYLNMMSQQAGRMQSVVQDLLTLSRLEGSPPPGLTECTPVDALLRRCEDEARGLSALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TRSQSAGHVLEFPPAEALQGAGQLIGVTAELQSALANLIGNAVRYTPAGGRITVAWETLA HCCCCCCCEEECCCHHHHHCCCCEEEHHHHHHHHHHHHHCCCEEECCCCCEEEEEEEECC DGSARFSVRDTGPGIESVHIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHVVQRHSASLG CCCCEEEEECCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC IESTVGKGSVFSVTFPPHRIQRSAPVRGAPAKAC CCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043; 2115874 [H]