Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611213
Identifier: 120611213
GI number: 120611213
Start: 2793409
End: 2793990
Strand: Direct
Name: 120611213
Synonym: Aave_2544
Alternate gene names: NA
Gene position: 2793409-2793990 (Clockwise)
Preceding gene: 120611212
Following gene: 120611214
Centisome position: 52.19
GC content: 74.05
Gene sequence:
>582_bases ATGACGCTCGCCGGCCGTTCCGTCATCGTGGTGCCGGGCTGGCGGGACTCCGGCCCCGGCCATTGGCAGACGCTCTGGGC GGACCGCCTGCCCGGGGCGCGCAGGGTGGTGCAGGACGACTGGATCACCCCGACGCGCGAAGCCTGGGTCCGGACCCTGG AGCGCACCGTGCAGGAGGCGCCCCATCCGGTGGTCATCGTCGCCCACAGCCTGGGCTGCATCGCGTCGGCACACATGGGC CCGCAGGCCCGGTCCCGCGTGGCGGGGGCCCTGCTGGTGGCGCCCGCCGACCCGGAGCGCCGGGCCGTGCTCAGCGATTT CGCCCCCGTGCCCTATGAGCCCTTGCCCTATCGCAGCATCCTGGTGGCCAGCAGCAACGATCCGTATTGCCCCGTCCGCC TGGCCGGTGCCTATGCCCGGGCGTGGGGCAGCGAATTCGTCCGGCTGCAGCAGGCCGGACACATCAACGTGGAGTCCGGC CACGGCGAGTGGCCCCTCGGCTGGGCCTTGCTGCACTCCCTCGCGGAAGACGTGGCCTGGGGACCGGGCGGCGGTGCGGA GCCGGTGCGCTCCGCGGCCTGA
Upstream 100 bases:
>100_bases AAGGCCCCTGGCTGCCCGTCCGGACGGCTCCGGCTGCCCGGGCTTTGCTTCCCGTGGCCGGGGCCGGGGCGCTTGGGTGC GCGGCCGCGCGGAGGCAGCC
Downstream 100 bases:
>100_bases GCCAGCGCGCCGTGCGCCCGGCGCTTTATGCCCTGGTCTGATTAATTAACAAGAATCTATTCTTTTGAGTTGGAAGCGTT GGCGTTCACAATGGGTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTLAGRSVIVVPGWRDSGPGHWQTLWADRLPGARRVVQDDWITPTREAWVRTLERTVQEAPHPVVIVAHSLGCIASAHMG PQARSRVAGALLVAPADPERRAVLSDFAPVPYEPLPYRSILVASSNDPYCPVRLAGAYARAWGSEFVRLQQAGHINVESG HGEWPLGWALLHSLAEDVAWGPGGGAEPVRSAA
Sequences:
>Translated_193_residues MTLAGRSVIVVPGWRDSGPGHWQTLWADRLPGARRVVQDDWITPTREAWVRTLERTVQEAPHPVVIVAHSLGCIASAHMG PQARSRVAGALLVAPADPERRAVLSDFAPVPYEPLPYRSILVASSNDPYCPVRLAGAYARAWGSEFVRLQQAGHINVESG HGEWPLGWALLHSLAEDVAWGPGGGAEPVRSAA >Mature_192_residues TLAGRSVIVVPGWRDSGPGHWQTLWADRLPGARRVVQDDWITPTREAWVRTLERTVQEAPHPVVIVAHSLGCIASAHMGP QARSRVAGALLVAPADPERRAVLSDFAPVPYEPLPYRSILVASSNDPYCPVRLAGAYARAWGSEFVRLQQAGHINVESGH GEWPLGWALLHSLAEDVAWGPGGGAEPVRSAA
Specific function: Unknown
COG id: COG3545
COG function: function code R; Predicted esterase of the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20839; Mature: 20708
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAGRSVIVVPGWRDSGPGHWQTLWADRLPGARRVVQDDWITPTREAWVRTLERTVQEA CCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHC PHPVVIVAHSLGCIASAHMGPQARSRVAGALLVAPADPERRAVLSDFAPVPYEPLPYRSI CCCEEEEEECCCHHHHHCCCHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCEE LVASSNDPYCPVRLAGAYARAWGSEFVRLQQAGHINVESGHGEWPLGWALLHSLAEDVAW EEECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCC GPGGGAEPVRSAA CCCCCCCCCCCCC >Mature Secondary Structure TLAGRSVIVVPGWRDSGPGHWQTLWADRLPGARRVVQDDWITPTREAWVRTLERTVQEA CCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHC PHPVVIVAHSLGCIASAHMGPQARSRVAGALLVAPADPERRAVLSDFAPVPYEPLPYRSI CCCEEEEEECCCHHHHHCCCHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCEE LVASSNDPYCPVRLAGAYARAWGSEFVRLQQAGHINVESGHGEWPLGWALLHSLAEDVAW EEECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCC GPGGGAEPVRSAA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA