Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is mexA [H]
Identifier: 120611196
GI number: 120611196
Start: 2772159
End: 2773349
Strand: Direct
Name: mexA [H]
Synonym: Aave_2527
Alternate gene names: 120611196
Gene position: 2772159-2773349 (Clockwise)
Preceding gene: 120611191
Following gene: 120611197
Centisome position: 51.79
GC content: 75.82
Gene sequence:
>1191_bases ATGCACACCCCCCGACGGCGACAGGCCGCGATGGCGGCGGCGGCGCTGGCCGCGCTGGTATTGGCCGCGTGCGGTACCGA CGAGGCGCAGGACGCCCCCGCGCCGCCGGCGCAGGTGTCCGTGGCCACGCTGGTGCCCGGTGATCTCGTGGTGGCCGACG ATCTGCCCGGCCGGGTGGCCGCGGTGCGCACGGCGGAGATCCGGGCGCAGGTCGGGGGCATCGTGCAGCGCAGGCTGTTC GAGCAGGGGGCGGAGATCCGGCAGGGCGCGCCGCTCTTCCAGATCCATCCCGGGCCGTTCCAGGCCGATGCCGACATGGC CCAGGCGGCACTGCAGCGCGCGCAGGCGGCCTGGGCCCGGGCACGCCTGCAGGCCGAGCGGCTGGAGCCGCTGGTGCAGG CCGATGCCGTGAGCCGGCAGGCCTATGACGACGCGGTCTCGCAGCGCGACCAGGCCGCGGCCGAGGTGGCCCAGGCCCGG GCCACGCTCGCGCGCCGCCGGCTGGACCTGCGCTTCGCGACGGTGGAGGCGCCGATCGCGGGGCGGGTGGACCAGGCGCT GGTGACGGAAGGCGCGCTGGTCTCGCCCACCGATGCCTCGCCCATGGCGCGCATCCAGCAGATCGGACAGGTGTACGTGG ACGTGCGCCAGCCGGCGTCGGCGCTGGAAGGCCTGCGCGCGGCGGCCAGGCCGGAAGGCGGCGCGCAGGATGCCACCGTG CAGATCCTGCGCGGCGATGGCGAACCCTTCGGGATGCAGGGGCGCATGCTGTTTTCCGGCATCACGGTGGACGCGGGTAC CGGCGAGGTGCTGCTGCGCATCCTGGTGGACAACCCGCAGCGGCGCCTGCTGCCCGGCATGTTCGTGCAGGCGCGCGTGC CGCGGGCTGCCTATGCCCGGGCACTCACGGTGCCACAGCAGGCGGTGGTGCGCACGGGGGGCGAGGCCAGCGTCTGGGTG GTCGATGCACAGCGGCGCGCGCATGCGGTGCCCGTGCAGCTGGGTGAACTGGTGGACCGGCGCTACCGCATCGCGGCCGG GGTTCAGGCAGGGCAGCGGGTGGTGGTGGAGGGCGCCGAGCGCCTGACGGAAGGCGCGGAAGTACAGCCGCGCGACTGGA TCGCGCCCGGCGCGTCGGCCGCGTCCGCGAGCGCACCCGCGTCGCCTCCCGCGCCCTCGGCCAGCCGCTGA
Upstream 100 bases:
>100_bases TTCCGGCTCCACCGTATCTCCACACAACGCCCAATCCTTCGCAGCCGTGCGGCGCCACAGTGGCGCCCTTTTGAACGTGA ACGCGAAGGATTCCCCGTAT
Downstream 100 bases:
>100_bases ACACGGAGCCGAGCCATGCCCCAGTTCTTCATTCGCCGCCCGGTGTTCGCCTGGGTGATCGCCCTGTTCATCGTGCTGTT CGGCGCGATCGCCATTCCGC
Product: RND family efflux transporter MFP subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MHTPRRRQAAMAAAALAALVLAACGTDEAQDAPAPPAQVSVATLVPGDLVVADDLPGRVAAVRTAEIRAQVGGIVQRRLF EQGAEIRQGAPLFQIHPGPFQADADMAQAALQRAQAAWARARLQAERLEPLVQADAVSRQAYDDAVSQRDQAAAEVAQAR ATLARRRLDLRFATVEAPIAGRVDQALVTEGALVSPTDASPMARIQQIGQVYVDVRQPASALEGLRAAARPEGGAQDATV QILRGDGEPFGMQGRMLFSGITVDAGTGEVLLRILVDNPQRRLLPGMFVQARVPRAAYARALTVPQQAVVRTGGEASVWV VDAQRRAHAVPVQLGELVDRRYRIAAGVQAGQRVVVEGAERLTEGAEVQPRDWIAPGASAASASAPASPPAPSASR
Sequences:
>Translated_396_residues MHTPRRRQAAMAAAALAALVLAACGTDEAQDAPAPPAQVSVATLVPGDLVVADDLPGRVAAVRTAEIRAQVGGIVQRRLF EQGAEIRQGAPLFQIHPGPFQADADMAQAALQRAQAAWARARLQAERLEPLVQADAVSRQAYDDAVSQRDQAAAEVAQAR ATLARRRLDLRFATVEAPIAGRVDQALVTEGALVSPTDASPMARIQQIGQVYVDVRQPASALEGLRAAARPEGGAQDATV QILRGDGEPFGMQGRMLFSGITVDAGTGEVLLRILVDNPQRRLLPGMFVQARVPRAAYARALTVPQQAVVRTGGEASVWV VDAQRRAHAVPVQLGELVDRRYRIAAGVQAGQRVVVEGAERLTEGAEVQPRDWIAPGASAASASAPASPPAPSASR >Mature_396_residues MHTPRRRQAAMAAAALAALVLAACGTDEAQDAPAPPAQVSVATLVPGDLVVADDLPGRVAAVRTAEIRAQVGGIVQRRLF EQGAEIRQGAPLFQIHPGPFQADADMAQAALQRAQAAWARARLQAERLEPLVQADAVSRQAYDDAVSQRDQAAAEVAQAR ATLARRRLDLRFATVEAPIAGRVDQALVTEGALVSPTDASPMARIQQIGQVYVDVRQPASALEGLRAAARPEGGAQDATV QILRGDGEPFGMQGRMLFSGITVDAGTGEVLLRILVDNPQRRLLPGMFVQARVPRAAYARALTVPQQAVVRTGGEASVWV VDAQRRAHAVPVQLGELVDRRYRIAAGVQAGQRVVVEGAERLTEGAEVQPRDWIAPGASAASASAPASPPAPSASR
Specific function: The ability to export antibiotics and solvents is dramatically decreased in the presence of the proton conductor carbonyl cyanide m-chlorophenylhydrazone (CCCP), showing that an energized inner membrane is required for efflux. It is thought that the mexB
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Lipid-anchor. Note=The membrane anchor is not necessary for antibiotic efflux as the protein is functional when targeted to the periplasm by a foreign signal peptide [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789665, Length=359, Percent_Identity=35.6545961002786, Blast_Score=216, Evalue=2e-57, Organism=Escherichia coli, GI1786668, Length=375, Percent_Identity=35.7333333333333, Blast_Score=209, Evalue=2e-55, Organism=Escherichia coli, GI1789929, Length=367, Percent_Identity=34.3324250681199, Blast_Score=207, Evalue=9e-55, Organism=Escherichia coli, GI87082036, Length=314, Percent_Identity=27.0700636942675, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 41678; Mature: 41678
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTPRRRQAAMAAAALAALVLAACGTDEAQDAPAPPAQVSVATLVPGDLVVADDLPGRVA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCEE AVRTAEIRAQVGGIVQRRLFEQGAEIRQGAPLFQIHPGPFQADADMAQAALQRAQAAWAR HHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH ARLQAERLEPLVQADAVSRQAYDDAVSQRDQAAAEVAQARATLARRRLDLRFATVEAPIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCC GRVDQALVTEGALVSPTDASPMARIQQIGQVYVDVRQPASALEGLRAAARPEGGAQDATV CCHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEE QILRGDGEPFGMQGRMLFSGITVDAGTGEVLLRILVDNPQRRLLPGMFVQARVPRAAYAR EEEECCCCCCCCCCEEEEEEEEEECCCHHHEEEEECCCCHHHHCCCHHHHHCCCHHHHHH ALTVPQQAVVRTGGEASVWVVDAQRRAHAVPVQLGELVDRRYRIAAGVQAGQRVVVEGAE HHCCCHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RLTEGAEVQPRDWIAPGASAASASAPASPPAPSASR HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHTPRRRQAAMAAAALAALVLAACGTDEAQDAPAPPAQVSVATLVPGDLVVADDLPGRVA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCEE AVRTAEIRAQVGGIVQRRLFEQGAEIRQGAPLFQIHPGPFQADADMAQAALQRAQAAWAR HHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH ARLQAERLEPLVQADAVSRQAYDDAVSQRDQAAAEVAQARATLARRRLDLRFATVEAPIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCC GRVDQALVTEGALVSPTDASPMARIQQIGQVYVDVRQPASALEGLRAAARPEGGAQDATV CCHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEE QILRGDGEPFGMQGRMLFSGITVDAGTGEVLLRILVDNPQRRLLPGMFVQARVPRAAYAR EEEECCCCCCCCCCEEEEEEEEEECCCHHHEEEEECCCCHHHHCCCHHHHHCCCHHHHHH ALTVPQQAVVRTGGEASVWVVDAQRRAHAVPVQLGELVDRRYRIAAGVQAGQRVVVEGAE HHCCCHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RLTEGAEVQPRDWIAPGASAASASAPASPPAPSASR HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7968531; 10984043; 9989496; 8226684; 8540696; 9603892; 10671490 [H]