Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611168
Identifier: 120611168
GI number: 120611168
Start: 2736806
End: 2737303
Strand: Reverse
Name: 120611168
Synonym: Aave_2499
Alternate gene names: NA
Gene position: 2737303-2736806 (Counterclockwise)
Preceding gene: 120611169
Following gene: 120611167
Centisome position: 51.14
GC content: 64.66
Gene sequence:
>498_bases ATGCACATGAAGTTCCATACGACCTGCCCCCTGCTTCTCACGGTATTCATCGCGGTCTCGAGCCTGCATGCCCAGACCGC ATGCCCCTCCGGCGTGGCCGCCGGAAGCGCGCGCTGCGGTCCGGGCGGCGACAGCGGAGACAGTGCGCCTCCGCGGCCGA CAGGCCATTGGGTGAAAACCTGGGGAGCCCTCGTGAGTTCCAACCAGGCAGGTGGAGCGTGGTCCTCCAAAGGCAAGGAC TCGGAAGCAGACGCGCGCCAGGATGCCCTGACAAGATGCCAGGCCCAGGGCGCACCCGACTGCAAGGTGGACGCGACGTT CTTCAACCAGTGCATTGCCGTCTCCGGCTCCAGTGCGCAGCGGGGTGTTTTCACGAACACGGGAAAGAACAAGGAGGTTG CCGGCTCACGGGCCCTCAAGGACTGCCAGGACAGCGGCAGAGCGAACTGCGCAGTCGTGTTCAGCGAGTGCACGGATCCC TATTTCGTGCGGTACTAG
Upstream 100 bases:
>100_bases ACGTGCAGGCCAAGGCCAAAGCCAACCATGTGCAGGCAGGCAGCCCCCAGTGCCAGCTTCCCGTACCCGGCGCAGGCAAG CCGGACTGAGACAGGAAAGC
Downstream 100 bases:
>100_bases CCCTTCAGCCCCGGTAAAGAGGAAATGCGATGAATATGCAACTCACCCCCCCCATCCACTGCAAAATCTGCCAAACCGGC TCTTGCTGCACTTTTCATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MHMKFHTTCPLLLTVFIAVSSLHAQTACPSGVAAGSARCGPGGDSGDSAPPRPTGHWVKTWGALVSSNQAGGAWSSKGKD SEADARQDALTRCQAQGAPDCKVDATFFNQCIAVSGSSAQRGVFTNTGKNKEVAGSRALKDCQDSGRANCAVVFSECTDP YFVRY
Sequences:
>Translated_165_residues MHMKFHTTCPLLLTVFIAVSSLHAQTACPSGVAAGSARCGPGGDSGDSAPPRPTGHWVKTWGALVSSNQAGGAWSSKGKD SEADARQDALTRCQAQGAPDCKVDATFFNQCIAVSGSSAQRGVFTNTGKNKEVAGSRALKDCQDSGRANCAVVFSECTDP YFVRY >Mature_165_residues MHMKFHTTCPLLLTVFIAVSSLHAQTACPSGVAAGSARCGPGGDSGDSAPPRPTGHWVKTWGALVSSNQAGGAWSSKGKD SEADARQDALTRCQAQGAPDCKVDATFFNQCIAVSGSSAQRGVFTNTGKNKEVAGSRALKDCQDSGRANCAVVFSECTDP YFVRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17192; Mature: 17192
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHMKFHTTCPLLLTVFIAVSSLHAQTACPSGVAAGSARCGPGGDSGDSAPPRPTGHWVKT CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH WGALVSSNQAGGAWSSKGKDSEADARQDALTRCQAQGAPDCKVDATFFNQCIAVSGSSAQ HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCC RGVFTNTGKNKEVAGSRALKDCQDSGRANCAVVFSECTDPYFVRY CCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECC >Mature Secondary Structure MHMKFHTTCPLLLTVFIAVSSLHAQTACPSGVAAGSARCGPGGDSGDSAPPRPTGHWVKT CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH WGALVSSNQAGGAWSSKGKDSEADARQDALTRCQAQGAPDCKVDATFFNQCIAVSGSSAQ HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCC RGVFTNTGKNKEVAGSRALKDCQDSGRANCAVVFSECTDPYFVRY CCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA