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The map label for this gene is tse [H]

Identifier: 120611157

GI number: 120611157

Start: 2719889

End: 2721403

Strand: Direct

Name: tse [H]

Synonym: Aave_2486

Alternate gene names: 120611157

Gene position: 2719889-2721403 (Clockwise)

Preceding gene: 120611150

Following gene: 120611161

Centisome position: 50.81

GC content: 74.59

Gene sequence:

>1515_bases
ATGGCTGCCTTCCTGCCGCTGCGCCCGGGCGTCCGGCTTCTGCGCGGACTGCGGATTCCCGCCAAGCTGGCGCTGTGCAC
GGGCGTGGCGCTGGCGGCGCTGGGCCTCACTGTGTGGGCCTGCGCCGGCGGGGGCGTGGCCACGGGCGCCGGGGTGGCCT
TCGCGTGCGGCCTGGTCCTGGTCTATCTCGGCCTGGCGCTGGCGGCAGGGCTGTCGGAGGACCTGGGCCGCGTGGCCGAG
GCCATGGAGGCAGCCGCGCGCGGCGACCTGTCCCGCGCCGTGCCGTCCGGCGGGCGGGACGAACCGGCGGTGCTGGCGCA
GTCGCTGGCCCGCATGGTGGTGACGCTGTCCTCCATGGTGGCCGACATCCGCAGCAATGCGGCGCTGGTCGCGCATGCCG
GCCACAGTCTGGCCGTGGACAACCGGGCCCTGGCCGAGCGCACGGAGCAGCAGGCCGCGAGCCTGGAGCAGACCGCCGCC
AGCGTGGAGCAACTGGTGGCCGCCGTGCAGCAGAACGCACAGACGGCGCAGGCGGCGGACCGGCGGGCGTCGGAGCTGCG
CGCGGCGGCCGACGAGGGCACGCAGGCCATGGGCCGCGCGGTGGATTCGGTGCAGGCGATCCAGCAGGGCGCGCGGCGCA
TGGCGGAGATCACCGGCGTGATCGATTCCATCGCGTTCCAGACCAACATCCTGGCGCTCAATGCGGCCGTGGAAGCCGCC
CGCGCGGGCGAGCAGGGACGCGGCTTCGCGGTCGTGGCGGCGGAGGTGCGCACGCTGGCCCAGCGCTCGGGCCAGGCGGC
GCGCGAGATCCGCGACCTGATCGGCGATTCCGTGCGGCAGGTGGAGGCGAGCGCCGCGCTCATGCGCGCCGCGGGCGACG
GCATCGGCGGCATGGCCGAGGGCATCCGCGGCGTGGCCGCCCACGTGAGCGAAATTTCGGGCTCGGGCGCCCAGCAGAGT
GCCGGCCTGGCGGAGATCAGCGCGGCCGTGCAGCAGATCGACGGGGTCACCCAGCACAACGCGCGCATGGTCGGACATGC
CGTGGCGCAGGCCGAGGCGCTCGGCAGCCGCGCCGCCACGCTGGCGAAGGCGGTGCAGGCCTTCCGGCTGCAGCAGGGCA
CGGCCGACGAGGCGCAGGCCCTGGTGGCGCGTGCCGCGGCGCAGCGCGCGGCCGCCGGCTCGCGGGAGGCCTTCCTGCGG
CAGCTGACCGATCCGGCCCAGCCCTTCCATGACCGGGACATGTACGTTTTCGTGCTGGACCGGGCCGGCACCTACCTGGC
TTTCGGCGGCAATCCCGCCAAGGTGGGCACCCGGGTGCAGGACATCCCCGGCATCGATGGCGCGCGGCTCGTGGAGGACA
TCGTGGCGCAGGCCGAGCGCGCGCCCGGCTGGGTGGAGTACGACATCACCAACCCGGCCACGGGCAAGGTGCAGACCAAG
ATGTCCTATGTGCAGGCACTGGAGGGCGCGTACCTGGGCTGCGGCGTGTACAAGTCGCTCGCGGCCCGGGCATGA

Upstream 100 bases:

>100_bases
GTCCGGCTCGTCGTATTCCCTCCTTGTCAATCCTCCGTAAGTGCCCGCCAATACCATCCGGGGACATCACGATCCATAAC
GAGAAAGAGGAGACAAGAGC

Downstream 100 bases:

>100_bases
ACCGCGGCGCGGGTACCGGCGGGTGCCCGCGCCGTGGTAATCATCGCGATCCGCCGCCCCGGCGCTCGCGGGCGCGTGCC
AGGGCCGCGGCGATGGCGGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MAAFLPLRPGVRLLRGLRIPAKLALCTGVALAALGLTVWACAGGGVATGAGVAFACGLVLVYLGLALAAGLSEDLGRVAE
AMEAAARGDLSRAVPSGGRDEPAVLAQSLARMVVTLSSMVADIRSNAALVAHAGHSLAVDNRALAERTEQQAASLEQTAA
SVEQLVAAVQQNAQTAQAADRRASELRAAADEGTQAMGRAVDSVQAIQQGARRMAEITGVIDSIAFQTNILALNAAVEAA
RAGEQGRGFAVVAAEVRTLAQRSGQAAREIRDLIGDSVRQVEASAALMRAAGDGIGGMAEGIRGVAAHVSEISGSGAQQS
AGLAEISAAVQQIDGVTQHNARMVGHAVAQAEALGSRAATLAKAVQAFRLQQGTADEAQALVARAAAQRAAAGSREAFLR
QLTDPAQPFHDRDMYVFVLDRAGTYLAFGGNPAKVGTRVQDIPGIDGARLVEDIVAQAERAPGWVEYDITNPATGKVQTK
MSYVQALEGAYLGCGVYKSLAARA

Sequences:

>Translated_504_residues
MAAFLPLRPGVRLLRGLRIPAKLALCTGVALAALGLTVWACAGGGVATGAGVAFACGLVLVYLGLALAAGLSEDLGRVAE
AMEAAARGDLSRAVPSGGRDEPAVLAQSLARMVVTLSSMVADIRSNAALVAHAGHSLAVDNRALAERTEQQAASLEQTAA
SVEQLVAAVQQNAQTAQAADRRASELRAAADEGTQAMGRAVDSVQAIQQGARRMAEITGVIDSIAFQTNILALNAAVEAA
RAGEQGRGFAVVAAEVRTLAQRSGQAAREIRDLIGDSVRQVEASAALMRAAGDGIGGMAEGIRGVAAHVSEISGSGAQQS
AGLAEISAAVQQIDGVTQHNARMVGHAVAQAEALGSRAATLAKAVQAFRLQQGTADEAQALVARAAAQRAAAGSREAFLR
QLTDPAQPFHDRDMYVFVLDRAGTYLAFGGNPAKVGTRVQDIPGIDGARLVEDIVAQAERAPGWVEYDITNPATGKVQTK
MSYVQALEGAYLGCGVYKSLAARA
>Mature_503_residues
AAFLPLRPGVRLLRGLRIPAKLALCTGVALAALGLTVWACAGGGVATGAGVAFACGLVLVYLGLALAAGLSEDLGRVAEA
MEAAARGDLSRAVPSGGRDEPAVLAQSLARMVVTLSSMVADIRSNAALVAHAGHSLAVDNRALAERTEQQAASLEQTAAS
VEQLVAAVQQNAQTAQAADRRASELRAAADEGTQAMGRAVDSVQAIQQGARRMAEITGVIDSIAFQTNILALNAAVEAAR
AGEQGRGFAVVAAEVRTLAQRSGQAAREIRDLIGDSVRQVEASAALMRAAGDGIGGMAEGIRGVAAHVSEISGSGAQQSA
GLAEISAAVQQIDGVTQHNARMVGHAVAQAEALGSRAATLAKAVQAFRLQQGTADEAQALVARAAAQRAAAGSREAFLRQ
LTDPAQPFHDRDMYVFVLDRAGTYLAFGGNPAKVGTRVQDIPGIDGARLVEDIVAQAERAPGWVEYDITNPATGKVQTKM
SYVQALEGAYLGCGVYKSLAARA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=323, Percent_Identity=42.4148606811146, Blast_Score=218, Evalue=5e-58,
Organism=Escherichia coli, GI2367378, Length=326, Percent_Identity=44.478527607362, Blast_Score=216, Evalue=3e-57,
Organism=Escherichia coli, GI1788195, Length=300, Percent_Identity=44, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1788194, Length=319, Percent_Identity=41.0658307210031, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI1789453, Length=314, Percent_Identity=34.0764331210191, Blast_Score=167, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 51638; Mature: 51507

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAFLPLRPGVRLLRGLRIPAKLALCTGVALAALGLTVWACAGGGVATGAGVAFACGLVL
CCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VYLGLALAAGLSEDLGRVAEAMEAAARGDLSRAVPSGGRDEPAVLAQSLARMVVTLSSMV
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ADIRSNAALVAHAGHSLAVDNRALAERTEQQAASLEQTAASVEQLVAAVQQNAQTAQAAD
HHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRASELRAAADEGTQAMGRAVDSVQAIQQGARRMAEITGVIDSIAFQTNILALNAAVEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGEQGRGFAVVAAEVRTLAQRSGQAAREIRDLIGDSVRQVEASAALMRAAGDGIGGMAE
HCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
GIRGVAAHVSEISGSGAQQSAGLAEISAAVQQIDGVTQHNARMVGHAVAQAEALGSRAAT
HHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAKAVQAFRLQQGTADEAQALVARAAAQRAAAGSREAFLRQLTDPAQPFHDRDMYVFVLD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEEE
RAGTYLAFGGNPAKVGTRVQDIPGIDGARLVEDIVAQAERAPGWVEYDITNPATGKVQTK
CCCCEEEECCCHHHHCCCHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHH
MSYVQALEGAYLGCGVYKSLAARA
HHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
AAFLPLRPGVRLLRGLRIPAKLALCTGVALAALGLTVWACAGGGVATGAGVAFACGLVL
CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VYLGLALAAGLSEDLGRVAEAMEAAARGDLSRAVPSGGRDEPAVLAQSLARMVVTLSSMV
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ADIRSNAALVAHAGHSLAVDNRALAERTEQQAASLEQTAASVEQLVAAVQQNAQTAQAAD
HHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRASELRAAADEGTQAMGRAVDSVQAIQQGARRMAEITGVIDSIAFQTNILALNAAVEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGEQGRGFAVVAAEVRTLAQRSGQAAREIRDLIGDSVRQVEASAALMRAAGDGIGGMAE
HCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
GIRGVAAHVSEISGSGAQQSAGLAEISAAVQQIDGVTQHNARMVGHAVAQAEALGSRAAT
HHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAKAVQAFRLQQGTADEAQALVARAAAQRAAAGSREAFLRQLTDPAQPFHDRDMYVFVLD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEEE
RAGTYLAFGGNPAKVGTRVQDIPGIDGARLVEDIVAQAERAPGWVEYDITNPATGKVQTK
CCCCEEEECCCHHHHCCCHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHH
MSYVQALEGAYLGCGVYKSLAARA
HHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]