Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611136
Identifier: 120611136
GI number: 120611136
Start: 2693105
End: 2695141
Strand: Reverse
Name: 120611136
Synonym: Aave_2465
Alternate gene names: NA
Gene position: 2695141-2693105 (Counterclockwise)
Preceding gene: 120611138
Following gene: 120611132
Centisome position: 50.35
GC content: 65.1
Gene sequence:
>2037_bases ATGGCATCCCCACTGAAACGATCTACAACAGAATCCATGGACCGCGAACTCCCACGTCCTTCCGACGCATCCTCCACGCC TTCCCTGCAGCGCCGCGCGCTGCTGAAACTGCTGGCCGGCACCCCCATGCTGCCCCTCGGCGGCGCGCTTGCCGCCACCG CCCTGGCGGGCTGCGGCGGCGGCAGCGATGGCAGTCCGACGGCCACCATGACCTCCGCATCCTTCGTCGGCATGGCCGCG CCCGACCTGAGCCAGGCCGCCGCCATGGCCAGCTGCACGGTGGGCTCGCAACTCAAGGTCGGTTTCAGCGACGGCAGCAG CCACCTGCTCCAGCTGGCCTACCAGCCGTTCTTCCTGACCGGTGACAAGGTGCCCGATGGCAAGGGCGGCACCCTCGTCG CCGGCGGTATCTACGACATCAACAACCGCCCCATCATCGACGCGTCGGTGCCCGGCAAGGAGCGCCAGTTCTTCTCCGAC TGCCCGGACGGGACTTCGCTGCTGACGGTGCCCAACGCGAAAGTGGACGGCGTCAAGGGCAATCCGGTTTTCGCCGTGGT GCAGTTCGAATACACCGACACCAACTTGGCCAACGCCGACAAAACCGATCAGCTGTGGGCCGAACTGCCCTCGCCCATCG CCGTGCTGACGTTGGATCAGGACCCGGCCACCGGCAGGCTGTCGCTGGTCAAGTACCACAATGTGGACACCTCTGCCGTC CACGGCCTGTGGGTGACCTGCGGCGCCAGCATCTCCCCCTGGGGCACGCACCTCTCCAGCGAAGAGTACGAGCCCGACGC CTTCCGCCAGGGCATGGGCGGTGCCACCACGGTGAAGATCGACCGCTTCAGCGCCAACCTGTACGGCGATGCCTCCAAAG CCAACCCCTACCACTACGGCCACATCCCCGAAGTGACCGTGAACCCCGATGGCACGGGCAGCATCAGGAAGCACTACTGC ATGGGCCGCATCTCGCACGAACTGATCCAGGTCATGCCCGATGAGCGCACCGCGCTGATGGGCGACGATGCCACCAACGG CGGCTGGTTCATGTTCGTGGCCGACAAGGCGCGCGACCTGTCCTCGGGCACGCTCTATGTCGCGCACTGGACCGAAAAGC TCACCGATACCAGCACGGCCGCCATGCAGTGGATCAAGCTGGGCAGTGCGACCAGCGCAGAGATCGAGGCCATGATCAAC AGCGGCATCAAGCCGACAGACATCATGGACTCCACCACGACCAACCCGAACGATCCGAGCTACACGCGGATCATGCTGAA CAAGAACAACAACTGCTGGGTGCGTCTGAAGCCCGGCATGGAAAAGGCCGCCGCCTTCCTGGAAACGCACCGCTACGCAG CCCTGGTGGGCGGCAGCCTGGCGCTCACCAAGAGCGAAGGCGTGACGGTGAACGTGCGCGACAAGGTGGCTTATTCCGTG GTCTCCAGCATCCGCGACTCCATGGTGGTCGGCGGCAATGGCTACGTGGAATCGCACAATGTGGCCTTCCCCAGGCGCGT CAACGCGGGCGGCATCCTGGCCCACGATCTGGCCGGCGGCCAGAAGGACAGCGCCGGCAACGCCATCGACAGCGACTGGG TGCCCAAGCAGTCCCGCGTGCTGCTGATGGGTGAAGACATCGCAGCAGACGCTCTGGGCAACACGGCCCACCCCGACAAG ATCGCGAGCCCCGACAACATCAAGTTCTCGGAAGGCATGCGCACGCTGTTCATCGGCGAGGACACGACCGACCACGTCAA CAATTTCCTGTGGGCGTACAACGTGGACACGAAAACGCTCAGCCGCGTGCTCTCCACCCCGGCCGGCGCCGAATCCACCG GCCTGCACGCGGTGGACAGCATCAACGGCTGGACCTACATCATGAGCAACTTCCAGCACCCGGGCGACTGGCAGTCGGTC CACGGCAAGGTCAAGGACACGCTCGACCCGCTGGTGCGCAAGAACTACAACAACCGCTTCTCGGCCGCAGTGGGCTACCT GACAGCGACGGACGCTGCCATTTCGCTGCGCCGCTGA
Upstream 100 bases:
>100_bases CCGGGCGGCACCTGTGCGCTGTCACTGTCGAGTCACCGATCCCGGCGAACATTCCCAGCTCATCCGCTTCCATGCTTTTT TTTTCCATGGCGCCGGGTGA
Downstream 100 bases:
>100_bases ACGGGTCGGTCAGCCGGCTGGGCCTGCCACGCCCAGAATCCGGTTGAGGGTCGCACCGTGCCCGGGCTGCGACCCTGCTC GATATCGAGCAGCGTTTTCT
Product: phosphatase-like protein
Products: NA
Alternate protein names: Phosphatase; Exported Alkaline Phosphatase; Phosphatase-Like Protein; Cell Surface Protein; Phosphatase Or Zinc Metalloprotease With Signal Peptide; Twin-Arginine Translocation Pathway Signal; PKD Domain Protein; Lipoprotein
Number of amino acids: Translated: 678; Mature: 677
Protein sequence:
>678_residues MASPLKRSTTESMDRELPRPSDASSTPSLQRRALLKLLAGTPMLPLGGALAATALAGCGGGSDGSPTATMTSASFVGMAA PDLSQAAAMASCTVGSQLKVGFSDGSSHLLQLAYQPFFLTGDKVPDGKGGTLVAGGIYDINNRPIIDASVPGKERQFFSD CPDGTSLLTVPNAKVDGVKGNPVFAVVQFEYTDTNLANADKTDQLWAELPSPIAVLTLDQDPATGRLSLVKYHNVDTSAV HGLWVTCGASISPWGTHLSSEEYEPDAFRQGMGGATTVKIDRFSANLYGDASKANPYHYGHIPEVTVNPDGTGSIRKHYC MGRISHELIQVMPDERTALMGDDATNGGWFMFVADKARDLSSGTLYVAHWTEKLTDTSTAAMQWIKLGSATSAEIEAMIN SGIKPTDIMDSTTTNPNDPSYTRIMLNKNNNCWVRLKPGMEKAAAFLETHRYAALVGGSLALTKSEGVTVNVRDKVAYSV VSSIRDSMVVGGNGYVESHNVAFPRRVNAGGILAHDLAGGQKDSAGNAIDSDWVPKQSRVLLMGEDIAADALGNTAHPDK IASPDNIKFSEGMRTLFIGEDTTDHVNNFLWAYNVDTKTLSRVLSTPAGAESTGLHAVDSINGWTYIMSNFQHPGDWQSV HGKVKDTLDPLVRKNYNNRFSAAVGYLTATDAAISLRR
Sequences:
>Translated_678_residues MASPLKRSTTESMDRELPRPSDASSTPSLQRRALLKLLAGTPMLPLGGALAATALAGCGGGSDGSPTATMTSASFVGMAA PDLSQAAAMASCTVGSQLKVGFSDGSSHLLQLAYQPFFLTGDKVPDGKGGTLVAGGIYDINNRPIIDASVPGKERQFFSD CPDGTSLLTVPNAKVDGVKGNPVFAVVQFEYTDTNLANADKTDQLWAELPSPIAVLTLDQDPATGRLSLVKYHNVDTSAV HGLWVTCGASISPWGTHLSSEEYEPDAFRQGMGGATTVKIDRFSANLYGDASKANPYHYGHIPEVTVNPDGTGSIRKHYC MGRISHELIQVMPDERTALMGDDATNGGWFMFVADKARDLSSGTLYVAHWTEKLTDTSTAAMQWIKLGSATSAEIEAMIN SGIKPTDIMDSTTTNPNDPSYTRIMLNKNNNCWVRLKPGMEKAAAFLETHRYAALVGGSLALTKSEGVTVNVRDKVAYSV VSSIRDSMVVGGNGYVESHNVAFPRRVNAGGILAHDLAGGQKDSAGNAIDSDWVPKQSRVLLMGEDIAADALGNTAHPDK IASPDNIKFSEGMRTLFIGEDTTDHVNNFLWAYNVDTKTLSRVLSTPAGAESTGLHAVDSINGWTYIMSNFQHPGDWQSV HGKVKDTLDPLVRKNYNNRFSAAVGYLTATDAAISLRR >Mature_677_residues ASPLKRSTTESMDRELPRPSDASSTPSLQRRALLKLLAGTPMLPLGGALAATALAGCGGGSDGSPTATMTSASFVGMAAP DLSQAAAMASCTVGSQLKVGFSDGSSHLLQLAYQPFFLTGDKVPDGKGGTLVAGGIYDINNRPIIDASVPGKERQFFSDC PDGTSLLTVPNAKVDGVKGNPVFAVVQFEYTDTNLANADKTDQLWAELPSPIAVLTLDQDPATGRLSLVKYHNVDTSAVH GLWVTCGASISPWGTHLSSEEYEPDAFRQGMGGATTVKIDRFSANLYGDASKANPYHYGHIPEVTVNPDGTGSIRKHYCM GRISHELIQVMPDERTALMGDDATNGGWFMFVADKARDLSSGTLYVAHWTEKLTDTSTAAMQWIKLGSATSAEIEAMINS GIKPTDIMDSTTTNPNDPSYTRIMLNKNNNCWVRLKPGMEKAAAFLETHRYAALVGGSLALTKSEGVTVNVRDKVAYSVV SSIRDSMVVGGNGYVESHNVAFPRRVNAGGILAHDLAGGQKDSAGNAIDSDWVPKQSRVLLMGEDIAADALGNTAHPDKI ASPDNIKFSEGMRTLFIGEDTTDHVNNFLWAYNVDTKTLSRVLSTPAGAESTGLHAVDSINGWTYIMSNFQHPGDWQSVH GKVKDTLDPLVRKNYNNRFSAAVGYLTATDAAISLRR
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72320; Mature: 72189
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPLKRSTTESMDRELPRPSDASSTPSLQRRALLKLLAGTPMLPLGGALAATALAGCGG CCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC GSDGSPTATMTSASFVGMAAPDLSQAAAMASCTVGSQLKVGFSDGSSHLLQLAYQPFFLT CCCCCCCEEEECCCEEEECCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCEEEE GDKVPDGKGGTLVAGGIYDINNRPIIDASVPGKERQFFSDCPDGTSLLTVPNAKVDGVKG CCCCCCCCCCEEEECCEEECCCCEEEECCCCCCHHHHHHCCCCCCEEEEECCCEECCCCC NPVFAVVQFEYTDTNLANADKTDQLWAELPSPIAVLTLDQDPATGRLSLVKYHNVDTSAV CCEEEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCHHH HGLWVTCGASISPWGTHLSSEEYEPDAFRQGMGGATTVKIDRFSANLYGDASKANPYHYG CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEEECCEECCCCCCCCEECC HIPEVTVNPDGTGSIRKHYCMGRISHELIQVMPDERTALMGDDATNGGWFMFVADKARDL CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCC SSGTLYVAHWTEKLTDTSTAAMQWIKLGSATSAEIEAMINSGIKPTDIMDSTTTNPNDPS CCCEEEEEECCHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC YTRIMLNKNNNCWVRLKPGMEKAAAFLETHRYAALVGGSLALTKSEGVTVNVRDKVAYSV EEEEEEECCCCEEEEECCCHHHHHHHHHHHHEEEEECCEEEEEECCCEEEEEHHHHHHHH VSSIRDSMVVGGNGYVESHNVAFPRRVNAGGILAHDLAGGQKDSAGNAIDSDWVPKQSRV HHHHHHCEEECCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEE LLMGEDIAADALGNTAHPDKIASPDNIKFSEGMRTLFIGEDTTDHVNNFLWAYNVDTKTL EEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCEEEEEECCHHHH SRVLSTPAGAESTGLHAVDSINGWTYIMSNFQHPGDWQSVHGKVKDTLDPLVRKNYNNRF HHHHCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCH SAAVGYLTATDAAISLRR HHHEEEEEECCCEEEECC >Mature Secondary Structure ASPLKRSTTESMDRELPRPSDASSTPSLQRRALLKLLAGTPMLPLGGALAATALAGCGG CCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC GSDGSPTATMTSASFVGMAAPDLSQAAAMASCTVGSQLKVGFSDGSSHLLQLAYQPFFLT CCCCCCCEEEECCCEEEECCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCEEEE GDKVPDGKGGTLVAGGIYDINNRPIIDASVPGKERQFFSDCPDGTSLLTVPNAKVDGVKG CCCCCCCCCCEEEECCEEECCCCEEEECCCCCCHHHHHHCCCCCCEEEEECCCEECCCCC NPVFAVVQFEYTDTNLANADKTDQLWAELPSPIAVLTLDQDPATGRLSLVKYHNVDTSAV CCEEEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCHHH HGLWVTCGASISPWGTHLSSEEYEPDAFRQGMGGATTVKIDRFSANLYGDASKANPYHYG CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEEECCEECCCCCCCCEECC HIPEVTVNPDGTGSIRKHYCMGRISHELIQVMPDERTALMGDDATNGGWFMFVADKARDL CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCC SSGTLYVAHWTEKLTDTSTAAMQWIKLGSATSAEIEAMINSGIKPTDIMDSTTTNPNDPS CCCEEEEEECCHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC YTRIMLNKNNNCWVRLKPGMEKAAAFLETHRYAALVGGSLALTKSEGVTVNVRDKVAYSV EEEEEEECCCCEEEEECCCHHHHHHHHHHHHEEEEECCEEEEEECCCEEEEEHHHHHHHH VSSIRDSMVVGGNGYVESHNVAFPRRVNAGGILAHDLAGGQKDSAGNAIDSDWVPKQSRV HHHHHHCEEECCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEE LLMGEDIAADALGNTAHPDKIASPDNIKFSEGMRTLFIGEDTTDHVNNFLWAYNVDTKTL EEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCEEEEEECCHHHH SRVLSTPAGAESTGLHAVDSINGWTYIMSNFQHPGDWQSVHGKVKDTLDPLVRKNYNNRF HHHHCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCH SAAVGYLTATDAAISLRR HHHEEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA