Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is aceE [H]
Identifier: 120611133
GI number: 120611133
Start: 2686571
End: 2689294
Strand: Direct
Name: aceE [H]
Synonym: Aave_2462
Alternate gene names: 120611133
Gene position: 2686571-2689294 (Clockwise)
Preceding gene: 120611127
Following gene: 120611134
Centisome position: 50.19
GC content: 65.64
Gene sequence:
>2724_bases ATGACTGCTCAGACCGACCCTCAGGCCGGAAAAACCGCGACGTCCGCCCCCGATACCGACCAACAGGAGACCCGCGAGTG GATGGACGCACTGTCTGCCGTGATCGACCGCGAAGGCGCTGAACGGGCCCACTTCCTGCTCGAGCAATTGCTCGAACACG CGCGCCAGAGCAGCATCGACATGCCGTTCTCCGCCAACACGGGCTACGTGAACACGATCGAGCCCAGCCAGGAGGCACGC TGCCCCGGCAATCTGGAAATCGAAGCGCGCCTGCGCGCCTACATGCGCTGGAACGCCATGGCGATGGTGGTCAAAGCCAA CCGCCACCATCCTCCCGAAGGCGGCGACCTGGGCGGCCACATCGGCTCCTTCGCCTCCCTGGCCAACATGTTCGGCGCAG GTTTCAACCACTTCTGGCACGCAGAGAGCGAGAACCACGGCGGCGACCTGCTGTACATCCAGGGCCATGTGTCCCCCGGC ATCTATGCGCGCGCCTACCTGGAAGGCCGCCTGACCGAGGAACAACTGCTGAACTTCCGCCAGGAAGTGGACGGCAAGGG TCTCTCCAGCTACCCGCATCCCAAGCTGATGCCCGAGTTCTGGCAGTTCCCGACGGTCTCGATGGGCCTGGGCCCGCTGA TGGCCATCTACCAGGCCCGTTTCCTCAAATATCTGCAGGCCCGCGGCATCGCCAACACCGAGAACCGCAAGGTCTGGGTG TTCTGCGGCGACGGCGAGATGGACGAGGTGGAATCCCTGGGCGCGATCGGCCTGGCCGCGCGCGAGAACCTCGACAACCT GATCTTCGTCATCAACTGCAACCTGCAGCGCCTGGACGGCCCGGTGCGCGGCAACGGCAAGATCATCCAGGAGCTGGAAG GCGAATTCCGCGGCTCCGGCTGGAACGTGATCAAGCTGCTGTGGGGCAAGGGCTGGGACGACCTGCTGGCCCGCGACAAG GACGGCGCGCTGCGCAAGATCATGATGGACTGCAACGACGGGGACTACCAGTCGTTCAAGGCCAATGACGGCGCCTACGT GCGCAAGAACTTCTTCGGCCGCGATCCGCGCACGCTGAAGATGGTCGAGCACATGAGCGACGACGAGATCTGGAACCTGC GCCGCGGCGGCCACGACGCGCAGAAGGTCTATGCGGCGTTCAAGGCGGCCAACGAGCACAAGGGCCAGCCCACGGTGCTG CTGGTGAAGACCGTCAAGGGCTTCGGCATGGGCAAGATCGGCGAGGGCAAGAACACCGTCCACCAGACCAAGAAGCTCGG CGACGAGGACATCAAGGCCTTCCGCGACCGCTTCAACATTCCGATTCCCGACAGCCAGATCGCCGACCTGCCGTTCTACA AGCCGGCCGACGACACCCCGGAAATGAAGTACCTGCACGAGCGCCGCAAGGCCCTCGGCGGCTACCTGCCGCACCGCCGC ACGAAGGCCGACGAGAGCTTCACCGTGCCGTCGCTGGAAACCTTCAAGGCCGTGCTCGATCCCACGCCCGAAGGCCGCGA GATCTCGACCACGCAGGCCTACGTGCGCTTCCTCACGCAGCTGCTGCGCGACCAGGCCATCGGCCCGCGCGTGGTGCCCA TCCTGGTGGACGAGGCCCGCACCTTCGGCATGGAAGGCCTGTTCCGCCAGATCGGCATCTACAACCCGCACGGCCAGCAG TACACCCCGGTGGACAAGGACCAGGTGATGTACTACCGCGAGGACAAGGCCGGCCAGATCCTGCAGGAAGGCATCAACGA GGCCGGCGGCATGTCCAGCTGGATCGCCGCGGCCACGTCGTACAGCACGAACAACCGGATCATGATCCCGTTCTACGTGT ACTACTCGATGTTCGGCTTCCAGCGCGTCGGCGACCTGGCCTGGGCGGCCGGCGACATGCAGGCGCGGGGCTTCCTGCTG GGCGGCACGTCGGGCCGCACCACGCTGAACGGCGAAGGCCTGCAGCACGAGGACGGCCACAGCCACATCCTGGCCAACAC GATTCCGAACTGCATCAGCTACGACCCGACCTTCGCGCACGAAGTCGCCGTCATCATGCACGACGGCCTGAAGCGCATGG TCGAGCGCCAGGAGAATGTCTTTTACTACCTGACGCTGCTCAACGAGAACTACGCCATGCCCGGCCTGCAGCCCGGCACG GAAGAGCAGATCATCAAGGGCATGTACCTCTGCAAACAGGCGCCGGCCCTCAAGAAGGGCGCGCCCGCCGTGCAGCTGCT GGGCAGCGGCACGATCCTGCGCGAGTCGTTCGTCGCCCAGGAACTGCTGGAGAAGGACTGGGGCGTGGCCGCGTCCGTGT GGAGCTGCCCGAGCTTCAACGAGCTGACGCGCGACGGCCAGGAGGCGGAGCGCTGGAACCTGCTGCACCCCACGGAAACG CCGCGCACGTCGTTCGTGGAGGAGCAGCTCGGCAAGACCGAGGGCCCGGTGATCGCTTCCACCGACTACATGAAGGCGTA CGCCGAGCAGATCCGTCCGTTCGTGCCCAAGGGCCGGACGTACAAGGTGCTGGGCACCGACGGCTTCGGCCGCAGCGACT TCCGCCGCAAGCTGCGCGAGCATTTCGAGGTGGACCGCCACTACATCGTCGTGGCCGCGCTCAAGGCCCTGGCCGAGGAT GGCAAGCTGCCCGCTGCCAAGGTGGCCGAGGCCATCCAGAAGTACGGCATCCAGGCCGACAAGGTGAACCCGCTGCACGC CTGA
Upstream 100 bases:
>100_bases ATATTGTGGTGTTGGAGCGCGCCATTCGAAATGTCGCGAAAGTGTGCGAAACTTCGCCGGATTTACCCCCCAACGCCAGC GACTTATCAAGGAGACAGGC
Downstream 100 bases:
>100_bases CCCCACCGGAGACAACAACATGGCACTGATTGACATCAAGGTCCCGGACATCGGGGATTTCGACGCCGTCGGCGTGATCG AACTGCTGGTGAAGCCCGGC
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 907; Mature: 906
Protein sequence:
>907_residues MTAQTDPQAGKTATSAPDTDQQETREWMDALSAVIDREGAERAHFLLEQLLEHARQSSIDMPFSANTGYVNTIEPSQEAR CPGNLEIEARLRAYMRWNAMAMVVKANRHHPPEGGDLGGHIGSFASLANMFGAGFNHFWHAESENHGGDLLYIQGHVSPG IYARAYLEGRLTEEQLLNFRQEVDGKGLSSYPHPKLMPEFWQFPTVSMGLGPLMAIYQARFLKYLQARGIANTENRKVWV FCGDGEMDEVESLGAIGLAARENLDNLIFVINCNLQRLDGPVRGNGKIIQELEGEFRGSGWNVIKLLWGKGWDDLLARDK DGALRKIMMDCNDGDYQSFKANDGAYVRKNFFGRDPRTLKMVEHMSDDEIWNLRRGGHDAQKVYAAFKAANEHKGQPTVL LVKTVKGFGMGKIGEGKNTVHQTKKLGDEDIKAFRDRFNIPIPDSQIADLPFYKPADDTPEMKYLHERRKALGGYLPHRR TKADESFTVPSLETFKAVLDPTPEGREISTTQAYVRFLTQLLRDQAIGPRVVPILVDEARTFGMEGLFRQIGIYNPHGQQ YTPVDKDQVMYYREDKAGQILQEGINEAGGMSSWIAAATSYSTNNRIMIPFYVYYSMFGFQRVGDLAWAAGDMQARGFLL GGTSGRTTLNGEGLQHEDGHSHILANTIPNCISYDPTFAHEVAVIMHDGLKRMVERQENVFYYLTLLNENYAMPGLQPGT EEQIIKGMYLCKQAPALKKGAPAVQLLGSGTILRESFVAQELLEKDWGVAASVWSCPSFNELTRDGQEAERWNLLHPTET PRTSFVEEQLGKTEGPVIASTDYMKAYAEQIRPFVPKGRTYKVLGTDGFGRSDFRRKLREHFEVDRHYIVVAALKALAED GKLPAAKVAEAIQKYGIQADKVNPLHA
Sequences:
>Translated_907_residues MTAQTDPQAGKTATSAPDTDQQETREWMDALSAVIDREGAERAHFLLEQLLEHARQSSIDMPFSANTGYVNTIEPSQEAR CPGNLEIEARLRAYMRWNAMAMVVKANRHHPPEGGDLGGHIGSFASLANMFGAGFNHFWHAESENHGGDLLYIQGHVSPG IYARAYLEGRLTEEQLLNFRQEVDGKGLSSYPHPKLMPEFWQFPTVSMGLGPLMAIYQARFLKYLQARGIANTENRKVWV FCGDGEMDEVESLGAIGLAARENLDNLIFVINCNLQRLDGPVRGNGKIIQELEGEFRGSGWNVIKLLWGKGWDDLLARDK DGALRKIMMDCNDGDYQSFKANDGAYVRKNFFGRDPRTLKMVEHMSDDEIWNLRRGGHDAQKVYAAFKAANEHKGQPTVL LVKTVKGFGMGKIGEGKNTVHQTKKLGDEDIKAFRDRFNIPIPDSQIADLPFYKPADDTPEMKYLHERRKALGGYLPHRR TKADESFTVPSLETFKAVLDPTPEGREISTTQAYVRFLTQLLRDQAIGPRVVPILVDEARTFGMEGLFRQIGIYNPHGQQ YTPVDKDQVMYYREDKAGQILQEGINEAGGMSSWIAAATSYSTNNRIMIPFYVYYSMFGFQRVGDLAWAAGDMQARGFLL GGTSGRTTLNGEGLQHEDGHSHILANTIPNCISYDPTFAHEVAVIMHDGLKRMVERQENVFYYLTLLNENYAMPGLQPGT EEQIIKGMYLCKQAPALKKGAPAVQLLGSGTILRESFVAQELLEKDWGVAASVWSCPSFNELTRDGQEAERWNLLHPTET PRTSFVEEQLGKTEGPVIASTDYMKAYAEQIRPFVPKGRTYKVLGTDGFGRSDFRRKLREHFEVDRHYIVVAALKALAED GKLPAAKVAEAIQKYGIQADKVNPLHA >Mature_906_residues TAQTDPQAGKTATSAPDTDQQETREWMDALSAVIDREGAERAHFLLEQLLEHARQSSIDMPFSANTGYVNTIEPSQEARC PGNLEIEARLRAYMRWNAMAMVVKANRHHPPEGGDLGGHIGSFASLANMFGAGFNHFWHAESENHGGDLLYIQGHVSPGI YARAYLEGRLTEEQLLNFRQEVDGKGLSSYPHPKLMPEFWQFPTVSMGLGPLMAIYQARFLKYLQARGIANTENRKVWVF CGDGEMDEVESLGAIGLAARENLDNLIFVINCNLQRLDGPVRGNGKIIQELEGEFRGSGWNVIKLLWGKGWDDLLARDKD GALRKIMMDCNDGDYQSFKANDGAYVRKNFFGRDPRTLKMVEHMSDDEIWNLRRGGHDAQKVYAAFKAANEHKGQPTVLL VKTVKGFGMGKIGEGKNTVHQTKKLGDEDIKAFRDRFNIPIPDSQIADLPFYKPADDTPEMKYLHERRKALGGYLPHRRT KADESFTVPSLETFKAVLDPTPEGREISTTQAYVRFLTQLLRDQAIGPRVVPILVDEARTFGMEGLFRQIGIYNPHGQQY TPVDKDQVMYYREDKAGQILQEGINEAGGMSSWIAAATSYSTNNRIMIPFYVYYSMFGFQRVGDLAWAAGDMQARGFLLG GTSGRTTLNGEGLQHEDGHSHILANTIPNCISYDPTFAHEVAVIMHDGLKRMVERQENVFYYLTLLNENYAMPGLQPGTE EQIIKGMYLCKQAPALKKGAPAVQLLGSGTILRESFVAQELLEKDWGVAASVWSCPSFNELTRDGQEAERWNLLHPTETP RTSFVEEQLGKTEGPVIASTDYMKAYAEQIRPFVPKGRTYKVLGTDGFGRSDFRRKLREHFEVDRHYIVVAALKALAEDG KLPAAKVAEAIQKYGIQADKVNPLHA
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=891, Percent_Identity=59.4837261503928, Blast_Score=1098, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 101606; Mature: 101475
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQTDPQAGKTATSAPDTDQQETREWMDALSAVIDREGAERAHFLLEQLLEHARQSSID CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC MPFSANTGYVNTIEPSQEARCPGNLEIEARLRAYMRWNAMAMVVKANRHHPPEGGDLGGH CCCCCCCCEEEECCCCHHCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCH IGSFASLANMFGAGFNHFWHAESENHGGDLLYIQGHVSPGIYARAYLEGRLTEEQLLNFR HHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEECCCCCCEEEHHHHCCCCHHHHHHHH QEVDGKGLSSYPHPKLMPEFWQFPTVSMGLGPLMAIYQARFLKYLQARGIANTENRKVWV HHHCCCCCCCCCCCCCCHHHHCCCCCHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE FCGDGEMDEVESLGAIGLAARENLDNLIFVINCNLQRLDGPVRGNGKIIQELEGEFRGSG EECCCCHHHHHHCCHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCC WNVIKLLWGKGWDDLLARDKDGALRKIMMDCNDGDYQSFKANDGAYVRKNFFGRDPRTLK CEEEEEECCCCHHHHHHCCCCCHHHHHHCCCCCCCCCCEECCCCCEEHHHHCCCCCHHHH MVEHMSDDEIWNLRRGGHDAQKVYAAFKAANEHKGQPTVLLVKTVKGFGMGKIGEGKNTV HHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHH HQTKKLGDEDIKAFRDRFNIPIPDSQIADLPFYKPADDTPEMKYLHERRKALGGYLPHRR HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC TKADESFTVPSLETFKAVLDPTPEGREISTTQAYVRFLTQLLRDQAIGPRVVPILVDEAR CCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHH TFGMEGLFRQIGIYNPHGQQYTPVDKDQVMYYREDKAGQILQEGINEAGGMSSWIAAATS HHCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHC YSTNNRIMIPFYVYYSMFGFQRVGDLAWAAGDMQARGFLLGGTSGRTTLNGEGLQHEDGH CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEECCCCCCCCCCC SHILANTIPNCISYDPTFAHEVAVIMHDGLKRMVERQENVFYYLTLLNENYAMPGLQPGT CEEHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCC EEQIIKGMYLCKQAPALKKGAPAVQLLGSGTILRESFVAQELLEKDWGVAASVWSCPSFN HHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEHHCCCCCHH ELTRDGQEAERWNLLHPTETPRTSFVEEQLGKTEGPVIASTDYMKAYAEQIRPFVPKGRT HHHCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCCCCCCE YKVLGTDGFGRSDFRRKLREHFEVDRHYIVVAALKALAEDGKLPAAKVAEAIQKYGIQAD EEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC KVNPLHA CCCCCCC >Mature Secondary Structure TAQTDPQAGKTATSAPDTDQQETREWMDALSAVIDREGAERAHFLLEQLLEHARQSSID CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC MPFSANTGYVNTIEPSQEARCPGNLEIEARLRAYMRWNAMAMVVKANRHHPPEGGDLGGH CCCCCCCCEEEECCCCHHCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCH IGSFASLANMFGAGFNHFWHAESENHGGDLLYIQGHVSPGIYARAYLEGRLTEEQLLNFR HHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEECCCCCCEEEHHHHCCCCHHHHHHHH QEVDGKGLSSYPHPKLMPEFWQFPTVSMGLGPLMAIYQARFLKYLQARGIANTENRKVWV HHHCCCCCCCCCCCCCCHHHHCCCCCHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE FCGDGEMDEVESLGAIGLAARENLDNLIFVINCNLQRLDGPVRGNGKIIQELEGEFRGSG EECCCCHHHHHHCCHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCC WNVIKLLWGKGWDDLLARDKDGALRKIMMDCNDGDYQSFKANDGAYVRKNFFGRDPRTLK CEEEEEECCCCHHHHHHCCCCCHHHHHHCCCCCCCCCCEECCCCCEEHHHHCCCCCHHHH MVEHMSDDEIWNLRRGGHDAQKVYAAFKAANEHKGQPTVLLVKTVKGFGMGKIGEGKNTV HHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHH HQTKKLGDEDIKAFRDRFNIPIPDSQIADLPFYKPADDTPEMKYLHERRKALGGYLPHRR HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC TKADESFTVPSLETFKAVLDPTPEGREISTTQAYVRFLTQLLRDQAIGPRVVPILVDEAR CCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHH TFGMEGLFRQIGIYNPHGQQYTPVDKDQVMYYREDKAGQILQEGINEAGGMSSWIAAATS HHCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHC YSTNNRIMIPFYVYYSMFGFQRVGDLAWAAGDMQARGFLLGGTSGRTTLNGEGLQHEDGH CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEECCCCCCCCCCC SHILANTIPNCISYDPTFAHEVAVIMHDGLKRMVERQENVFYYLTLLNENYAMPGLQPGT CEEHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCC EEQIIKGMYLCKQAPALKKGAPAVQLLGSGTILRESFVAQELLEKDWGVAASVWSCPSFN HHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEHHCCCCCHH ELTRDGQEAERWNLLHPTETPRTSFVEEQLGKTEGPVIASTDYMKAYAEQIRPFVPKGRT HHHCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCCCCCCE YKVLGTDGFGRSDFRRKLREHFEVDRHYIVVAALKALAEDGKLPAAKVAEAIQKYGIQAD EEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC KVNPLHA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8021225 [H]