Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611125
Identifier: 120611125
GI number: 120611125
Start: 2677140
End: 2677499
Strand: Direct
Name: 120611125
Synonym: Aave_2454
Alternate gene names: NA
Gene position: 2677140-2677499 (Clockwise)
Preceding gene: 120611124
Following gene: 120611127
Centisome position: 50.01
GC content: 72.22
Gene sequence:
>360_bases ATGTCCGCACCGCACGCTTCCACGGCCGGCGAAACCGACTTCCGGCCGGCGCTCGGCGATCTGCACGCCACCCCCGAACA ACGCAAGATCCTCGAGCGCATCGCGCTGCAGCGCGAGCGCCTGCACAGCCGCCGTCTCGCGCAGCAGCAGGCCGCGGCAT TGCGCGCCCAGCAGGGGGCGGAAGGCGGCCCGCGGCCGCTGGACCCGGATGCTCCGCTGGTCGAGCGGGTCATCTGGTTC GCGCGGCAGCATCCGATCATGGTGGTGGCCGCCGCCGGGGCCGCGGCTGCCGTGGGCCCCAGCCGCATCATCCGCTGGGC GGGTGTGCTGATGCCCCTCGTCATGAAAATGAAGCGTTGA
Upstream 100 bases:
>100_bases GTCTCGTGACCACCGCCAGGCAGGCCGGCAACGCTTTCGCCCTCACGCGCCGCGAACTGCGCGAAGACTGGCGGCAGATC AAGGAAAGGCTGTAATCCCG
Downstream 100 bases:
>100_bases TCGGCGGCGCTGGCTATTCGCCACGCGCGGTCTGCGGATGGGACAGGCCGCGGGCTACGCGGCCGCAGCCGGCCTGTTTC CGTGCGCTCAGGCTGGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MSAPHASTAGETDFRPALGDLHATPEQRKILERIALQRERLHSRRLAQQQAAALRAQQGAEGGPRPLDPDAPLVERVIWF ARQHPIMVVAAAGAAAAVGPSRIIRWAGVLMPLVMKMKR
Sequences:
>Translated_119_residues MSAPHASTAGETDFRPALGDLHATPEQRKILERIALQRERLHSRRLAQQQAAALRAQQGAEGGPRPLDPDAPLVERVIWF ARQHPIMVVAAAGAAAAVGPSRIIRWAGVLMPLVMKMKR >Mature_118_residues SAPHASTAGETDFRPALGDLHATPEQRKILERIALQRERLHSRRLAQQQAAALRAQQGAEGGPRPLDPDAPLVERVIWFA RQHPIMVVAAAGAAAAVGPSRIIRWAGVLMPLVMKMKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12981; Mature: 12850
Theoretical pI: Translated: 11.97; Mature: 11.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPHASTAGETDFRPALGDLHATPEQRKILERIALQRERLHSRRLAQQQAAALRAQQGA CCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EGGPRPLDPDAPLVERVIWFARQHPIMVVAAAGAAAAVGPSRIIRWAGVLMPLVMKMKR CCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAPHASTAGETDFRPALGDLHATPEQRKILERIALQRERLHSRRLAQQQAAALRAQQGA CCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EGGPRPLDPDAPLVERVIWFARQHPIMVVAAAGAAAAVGPSRIIRWAGVLMPLVMKMKR CCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA