Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611089
Identifier: 120611089
GI number: 120611089
Start: 2641479
End: 2642249
Strand: Direct
Name: 120611089
Synonym: Aave_2418
Alternate gene names: NA
Gene position: 2641479-2642249 (Clockwise)
Preceding gene: 120611087
Following gene: 120611091
Centisome position: 49.35
GC content: 68.48
Gene sequence:
>771_bases ATGCTAGCGCAATCCGCGGTGCCGGCCGGTCAAAAAACGGGACAGGTGTGCAGCCTGCTCATCCATACGGGTGCGTTGGA AGTTTTTACAGGAATTCCACACTGCAGGGTCGGCGGAAGTGGCCGAAGCGCCCGTAGTCCTGGGCATGCCGTTTGCCCCC GCCGGGACATGGAGACCCACACGACGCCCCGTTCCCTGGACGCGTACGCCCACGCGCCTGCTCCCTCCGTTCCCGTGGCC CGCGAACCCTTGCGGTATCGGGAGCATGCCGGGCGCAGGGTGGGAATCCTGGTGTGGCCCAGCGGAGACGGATGGCGCGG CGCATGGTCCATGGGCAGCGGTGCCTGGTACGCGGTCCGCGGACGCTGGGGCAGCGAAGACCTGGCCGCCGAGAAGACGT TCATCGCGGCGCGATCATCCCTCGGGCAGGATGGTCTGCGGCGCCGCCGTCCATCCGCTACTCCGGCACATCGGCCTGCC GCGCTCTGCGCGGAGACGGAAGAGGCCGGTGAAAGGGGGCAGGCGCCCGCTTTGCGCGCTGCGTCCGAGCAGTGGAGCGA ATTGCGCCGGGACTGGCAGACCGCCGAAATGCGGCTGGCGAGGCGGCAGTCCGCCATCTGCCTGGGCGAGGGCCCTGCGG AGAATGCGGAGGATGCCAAAAGCCTGCGCGACCTCGAGCGGGAAGCCGAAAGCGCGCGCCAGCGGATGGACGATTATCTG AACGTGGTGCTGCGCATGCTGAGGCCTCAGGCGGGCAATGCCTCGTCCTGA
Upstream 100 bases:
>100_bases GCACCGGCCTCGGCCTCCTCGGCGGGGTCCGGGGTGATCTCGTCCATCTCTTGTCCTTGTGAGAGCGCACCCGCGGTGCG TGCAATACGGCTGGGCGACG
Downstream 100 bases:
>100_bases CCCGGCTCGCGTCTGTCACATACCTCACTCGTCGATTGCCGCGCTCCAGCGGCTGCCCCAGTCGCGCGCCTGGTCGATCT CGCGCCGGTCTCGCTTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MLAQSAVPAGQKTGQVCSLLIHTGALEVFTGIPHCRVGGSGRSARSPGHAVCPRRDMETHTTPRSLDAYAHAPAPSVPVA REPLRYREHAGRRVGILVWPSGDGWRGAWSMGSGAWYAVRGRWGSEDLAAEKTFIAARSSLGQDGLRRRRPSATPAHRPA ALCAETEEAGERGQAPALRAASEQWSELRRDWQTAEMRLARRQSAICLGEGPAENAEDAKSLRDLEREAESARQRMDDYL NVVLRMLRPQAGNASS
Sequences:
>Translated_256_residues MLAQSAVPAGQKTGQVCSLLIHTGALEVFTGIPHCRVGGSGRSARSPGHAVCPRRDMETHTTPRSLDAYAHAPAPSVPVA REPLRYREHAGRRVGILVWPSGDGWRGAWSMGSGAWYAVRGRWGSEDLAAEKTFIAARSSLGQDGLRRRRPSATPAHRPA ALCAETEEAGERGQAPALRAASEQWSELRRDWQTAEMRLARRQSAICLGEGPAENAEDAKSLRDLEREAESARQRMDDYL NVVLRMLRPQAGNASS >Mature_256_residues MLAQSAVPAGQKTGQVCSLLIHTGALEVFTGIPHCRVGGSGRSARSPGHAVCPRRDMETHTTPRSLDAYAHAPAPSVPVA REPLRYREHAGRRVGILVWPSGDGWRGAWSMGSGAWYAVRGRWGSEDLAAEKTFIAARSSLGQDGLRRRRPSATPAHRPA ALCAETEEAGERGQAPALRAASEQWSELRRDWQTAEMRLARRQSAICLGEGPAENAEDAKSLRDLEREAESARQRMDDYL NVVLRMLRPQAGNASS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27852; Mature: 27852
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAQSAVPAGQKTGQVCSLLIHTGALEVFTGIPHCRVGGSGRSARSPGHAVCPRRDMETH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCC TTPRSLDAYAHAPAPSVPVAREPLRYREHAGRRVGILVWPSGDGWRGAWSMGSGAWYAVR CCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEE GRWGSEDLAAEKTFIAARSSLGQDGLRRRRPSATPAHRPAALCAETEEAGERGQAPALRA CCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHCCHHHHCCCCCHHHHH ASEQWSELRRDWQTAEMRLARRQSAICLGEGPAENAEDAKSLRDLEREAESARQRMDDYL HHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NVVLRMLRPQAGNASS HHHHHHHCCCCCCCCC >Mature Secondary Structure MLAQSAVPAGQKTGQVCSLLIHTGALEVFTGIPHCRVGGSGRSARSPGHAVCPRRDMETH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCC TTPRSLDAYAHAPAPSVPVAREPLRYREHAGRRVGILVWPSGDGWRGAWSMGSGAWYAVR CCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEE GRWGSEDLAAEKTFIAARSSLGQDGLRRRRPSATPAHRPAALCAETEEAGERGQAPALRA CCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHCCHHHHCCCCCHHHHH ASEQWSELRRDWQTAEMRLARRQSAICLGEGPAENAEDAKSLRDLEREAESARQRMDDYL HHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NVVLRMLRPQAGNASS HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA