Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611082
Identifier: 120611082
GI number: 120611082
Start: 2631690
End: 2632520
Strand: Direct
Name: 120611082
Synonym: Aave_2411
Alternate gene names: NA
Gene position: 2631690-2632520 (Clockwise)
Preceding gene: 120611081
Following gene: 120611083
Centisome position: 49.16
GC content: 69.31
Gene sequence:
>831_bases GTGAGCACAACCGATGAAGATCGCCAGCGCCTGCTGAGCCCCGAAGAGCTGGTCGTCATGGCCGAGGACGACTACGACGC CGACGAACACAACGCGGCCGCGATGCGTGAGATTGGCCGCGGCGATCTGGACGACGAGGAGGAAGACGACGAGGCGAGGG GCGACGATAAGAAGGGCCGCACTGCCGCGCCCGCACCTGCGCCTGCAACTGCTCCTGCCCAGGCCGCAGCCCCTTCGCCA GTACCGGCCCCTGCGGCCGCGGAGGCTGACGCGTCTGCACCTGCTGCAGCGCCTGCGTCCGCCGAGGGTGGTGCGGCAAC CGTCGGCGCCCGGCCCGCACCGGCTCCCGCACCGCATCCCACCTACATGGCCGAACTGCCCGCGGATTACGACGCACAGG TGGCCGCGAACAAGGCCGCGCTGACGGACCTGCGCACGAAGTTCGACGACGGCGCGGTGGACGCCGCCGAATACCACGGC AAGTTGGACGAGCTGCAGGAGCAACGCGCGGATCTCCGCGAAGCCAAGACGCGGGCCCAGGTGGCAAGCGAGATGCGGGA GCAGGCTGAGGCGGGTGCATGGCTGTCGGCCATCAACACGTTAGCCGCCGACGCCGCTACGAAGCCGGAGCTGGGGCCTG GTGGACTACGCGAAGGACCATGCGAAGGCGGCCGACCTGGACATGTTCTTGAAGGTCTTGGCTGCCGCGCCGGAGAACGC CGCGAAGCCGTATCACTGGTTCCTGGAGGAAGGCCACCGCCGCGTGGTTGCACTGCATGGCATCGCCACCGCGAAGCCGG CGGCAGTAGCCCCTGCCACGCGCAAGCCTGA
Upstream 100 bases:
>100_bases ACCCACCGTCAGTTGTTGAAGAAAAAGTCCGGCCGGCTGTGCCCAGCGTCGTACCAAGCTTGCCAAATTTGTCCGGTCAT AACCACGACAGGATGAAACC
Downstream 100 bases:
>100_bases CGCCAGTGCGGTGGTCACCAACCTGGCGGATCTGCCAGGCGGCGGCGGTGATGCCGATCCCGTCGGCGACGAGTTCGCCG AGCTGGACAAGCTGACGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSTTDEDRQRLLSPEELVVMAEDDYDADEHNAAAMREIGRGDLDDEEEDDEARGDDKKGRTAAPAPAPATAPAQAAAPSP VPAPAAAEADASAPAAAPASAEGGAATVGARPAPAPAPHPTYMAELPADYDAQVAANKAALTDLRTKFDDGAVDAAEYHG KLDELQEQRADLREAKTRAQVASEMREQAEAGAWLSAINTLAADAATKPELGPGGLREGPCEGGRPGHVLEGLGCRAGER REAVSLVPGGRPPPRGCTAWHRHREAGGSSPCHAQA
Sequences:
>Translated_276_residues MSTTDEDRQRLLSPEELVVMAEDDYDADEHNAAAMREIGRGDLDDEEEDDEARGDDKKGRTAAPAPAPATAPAQAAAPSP VPAPAAAEADASAPAAAPASAEGGAATVGARPAPAPAPHPTYMAELPADYDAQVAANKAALTDLRTKFDDGAVDAAEYHG KLDELQEQRADLREAKTRAQVASEMREQAEAGAWLSAINTLAADAATKPELGPGGLREGPCEGGRPGHVLEGLGCRAGER REAVSLVPGGRPPPRGCTAWHRHREAGGSSPCHAQA >Mature_275_residues STTDEDRQRLLSPEELVVMAEDDYDADEHNAAAMREIGRGDLDDEEEDDEARGDDKKGRTAAPAPAPATAPAQAAAPSPV PAPAAAEADASAPAAAPASAEGGAATVGARPAPAPAPHPTYMAELPADYDAQVAANKAALTDLRTKFDDGAVDAAEYHGK LDELQEQRADLREAKTRAQVASEMREQAEAGAWLSAINTLAADAATKPELGPGGLREGPCEGGRPGHVLEGLGCRAGERR EAVSLVPGGRPPPRGCTAWHRHREAGGSSPCHAQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28480; Mature: 28349
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTDEDRQRLLSPEELVVMAEDDYDADEHNAAAMREIGRGDLDDEEEDDEARGDDKKGR CCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCC TAAPAPAPATAPAQAAAPSPVPAPAAAEADASAPAAAPASAEGGAATVGARPAPAPAPHP CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC TYMAELPADYDAQVAANKAALTDLRTKFDDGAVDAAEYHGKLDELQEQRADLREAKTRAQ CCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHH VASEMREQAEAGAWLSAINTLAADAATKPELGPGGLREGPCEGGRPGHVLEGLGCRAGER HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC REAVSLVPGGRPPPRGCTAWHRHREAGGSSPCHAQA CCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure STTDEDRQRLLSPEELVVMAEDDYDADEHNAAAMREIGRGDLDDEEEDDEARGDDKKGR CCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCC TAAPAPAPATAPAQAAAPSPVPAPAAAEADASAPAAAPASAEGGAATVGARPAPAPAPHP CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC TYMAELPADYDAQVAANKAALTDLRTKFDDGAVDAAEYHGKLDELQEQRADLREAKTRAQ CCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHH VASEMREQAEAGAWLSAINTLAADAATKPELGPGGLREGPCEGGRPGHVLEGLGCRAGER HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC REAVSLVPGGRPPPRGCTAWHRHREAGGSSPCHAQA CCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA