Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611074
Identifier: 120611074
GI number: 120611074
Start: 2624451
End: 2624786
Strand: Reverse
Name: 120611074
Synonym: Aave_2403
Alternate gene names: NA
Gene position: 2624786-2624451 (Counterclockwise)
Preceding gene: 120611075
Following gene: 120611073
Centisome position: 49.04
GC content: 46.13
Gene sequence:
>336_bases ATGGGTCAATTCTTTACCGCGCTATTTTCAAAAATAGCTGCAGTCGTTGAGTGGTTTGGAAAGTTATTTGTATCAATTTT TGTAGCCCTTTGGGATTTGGTGCGAGATGCGTTTTGCTGGCCGTTTGATCAAGTAACTGATATTGCCGTTTCGGCGGTGT CGTCAGTGGACTTGACAGGCTTGAGTGAGCATGTGGGCGCATGGTCCACGTTGCCAGCAGAGATAATTAATATACTTGGA TTATTGGGCGTTGGCACTGCGGCATCCATTATCGTCGCTGCGATTATTATTCGCATTGGCTTACAGCTAATCCCCTTCGT GAGGCTTGGATCATGA
Upstream 100 bases:
>100_bases CATGAGGTTGCGCCTCCGTGCTGGATTTGGCCTGCAGCAAAAGCGATTTTGATTGTTTCCGCGCTCATTCTTGCTCGTGC TTTGATCTTCGGGGGGTGAT
Downstream 100 bases:
>100_bases TTAATGGACTTGAGGGGATTCCCGGCTCCGGGAAAAGCTATGAGGCCGTGGCATACCATGTATTGCCTCAGCTTAAGCAG GGTCGTAAGGTCATAACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MGQFFTALFSKIAAVVEWFGKLFVSIFVALWDLVRDAFCWPFDQVTDIAVSAVSSVDLTGLSEHVGAWSTLPAEIINILG LLGVGTAASIIVAAIIIRIGLQLIPFVRLGS
Sequences:
>Translated_111_residues MGQFFTALFSKIAAVVEWFGKLFVSIFVALWDLVRDAFCWPFDQVTDIAVSAVSSVDLTGLSEHVGAWSTLPAEIINILG LLGVGTAASIIVAAIIIRIGLQLIPFVRLGS >Mature_110_residues GQFFTALFSKIAAVVEWFGKLFVSIFVALWDLVRDAFCWPFDQVTDIAVSAVSSVDLTGLSEHVGAWSTLPAEIINILGL LGVGTAASIIVAAIIIRIGLQLIPFVRLGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11894; Mature: 11763
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQFFTALFSKIAAVVEWFGKLFVSIFVALWDLVRDAFCWPFDQVTDIAVSAVSSVDLTG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LSEHVGAWSTLPAEIINILGLLGVGTAASIIVAAIIIRIGLQLIPFVRLGS HHHHHCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GQFFTALFSKIAAVVEWFGKLFVSIFVALWDLVRDAFCWPFDQVTDIAVSAVSSVDLTG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LSEHVGAWSTLPAEIINILGLLGVGTAASIIVAAIIIRIGLQLIPFVRLGS HHHHHCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA