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The map label for this gene is pinE [C]

Identifier: 120611067

GI number: 120611067

Start: 2619042

End: 2619533

Strand: Direct

Name: pinE [C]

Synonym: Aave_2396

Alternate gene names: 120611067

Gene position: 2619042-2619533 (Clockwise)

Preceding gene: 120611066

Following gene: 120611068

Centisome position: 48.93

GC content: 64.23

Gene sequence:

>492_bases
ATGCTTATCGGATATGCAAGAGTCAGCACACAAGACCAGGACACGGCGCTCCAGCTGGACGCGCTTGGCAAGGCTGGCTG
CGAGAGGATCTACCAAGAGAAGGCCAGCGGCGCTTCCAGGCGTGGCCGGCAAGAACTGGCGCGCTGCCTGGCCAGCCTGG
TCAAGGGCGACGTCCTGGTGGTCTACAAGATCGACCGGATAGCGCGCAGCCTTTTTGACCTCCTTGAGATCCTGCGTCAG
CTGGAGAGGGTGGGCGCCACCATCAAGAGCGTTACGGAGCCGTTGGACACCACAAACAGCATGGGGGTGTTCGTGGTGCA
GATCCTCGGCGCCGTCGCTCAGTTGGAACGGTCGATGATCAGGGAGAGGTCGATTGCCGGCCAGCTGGCGGCGAGGGAGA
GGGGGAGGCACCCGGGCAGAGTGCGAGCGCTGAGCGCGGAGGATGAGGCGGCGGCGGTCGCGGAGTACCGAGCTGAAGTT
GCCCCGGTTTGA

Upstream 100 bases:

>100_bases
GCAACCTCGGCGATCACTCGTGCTTGATAAACCGGTATTGGCGCGACAGCGCTCCCCGTGGCGCAGCCCTACATTCCGGT
CCCCACAGAAAGGGACCTAA

Downstream 100 bases:

>100_bases
CGGACACCTTACGCTGTAGAGCAAGGAGTTCGAAATGGGCAAGACAAGGCCGCCGTATCCGGCGGAGTTCCGAGAGCAGA
TAGTGGAGTTGGTGCGAGCT

Product: resolvase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MLIGYARVSTQDQDTALQLDALGKAGCERIYQEKASGASRRGRQELARCLASLVKGDVLVVYKIDRIARSLFDLLEILRQ
LERVGATIKSVTEPLDTTNSMGVFVVQILGAVAQLERSMIRERSIAGQLAARERGRHPGRVRALSAEDEAAAVAEYRAEV
APV

Sequences:

>Translated_163_residues
MLIGYARVSTQDQDTALQLDALGKAGCERIYQEKASGASRRGRQELARCLASLVKGDVLVVYKIDRIARSLFDLLEILRQ
LERVGATIKSVTEPLDTTNSMGVFVVQILGAVAQLERSMIRERSIAGQLAARERGRHPGRVRALSAEDEAAAVAEYRAEV
APV
>Mature_163_residues
MLIGYARVSTQDQDTALQLDALGKAGCERIYQEKASGASRRGRQELARCLASLVKGDVLVVYKIDRIARSLFDLLEILRQ
LERVGATIKSVTEPLDTTNSMGVFVVQILGAVAQLERSMIRERSIAGQLAARERGRHPGRVRALSAEDEAAAVAEYRAEV
APV

Specific function: This Protein Catalyzes The Inversion Of An 1800-Bp E.Coli DNA Fragment, The P Region, Which Can Exist In Either Orientation. The Function Of The Inversion Is Not Yet Clear. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787404, Length=152, Percent_Identity=44.7368421052632, Blast_Score=126, Evalue=6e-31,
Organism=Escherichia coli, GI1787827, Length=166, Percent_Identity=31.3253012048193, Blast_Score=71, Evalue=3e-14,
Organism=Escherichia coli, GI1787638, Length=166, Percent_Identity=30.7228915662651, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006118
- InterPro:   IPR006119 [H]

Pfam domain/function: PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 17808; Mature: 17808

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIGYARVSTQDQDTALQLDALGKAGCERIYQEKASGASRRGRQELARCLASLVKGDVLV
CEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCEEE
VYKIDRIARSLFDLLEILRQLERVGATIKSVTEPLDTTNSMGVFVVQILGAVAQLERSMI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RERSIAGQLAARERGRHPGRVRALSAEDEAAAVAEYRAEVAPV
HHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLIGYARVSTQDQDTALQLDALGKAGCERIYQEKASGASRRGRQELARCLASLVKGDVLV
CEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCEEE
VYKIDRIARSLFDLLEILRQLERVGATIKSVTEPLDTTNSMGVFVVQILGAVAQLERSMI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RERSIAGQLAARERGRHPGRVRALSAEDEAAAVAEYRAEVAPV
HHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]