Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611065
Identifier: 120611065
GI number: 120611065
Start: 2616727
End: 2617110
Strand: Direct
Name: 120611065
Synonym: Aave_2394
Alternate gene names: NA
Gene position: 2616727-2617110 (Clockwise)
Preceding gene: 120611064
Following gene: 120611066
Centisome position: 48.89
GC content: 60.94
Gene sequence:
>384_bases ATGGCAGAAGAAAGTTCGGGTATAGCCGCGGCGATCAGCGCCGTTGTGAAGGGCATCCAGAAGGTAGTGGACAAGCTGGA CCAGTTCGTCGACTGGTTCTTCGAGCTCTTCCCGCGCATGTTCAAGGCAGGGCTCACGCTCCTGCAGGACGTGTTTCTTT GGGCCTTCGAGCAGTGCCTCTCCCTCGCGAAATCAGCACTCGATGGCATCACCGGTCTTGACGCTATGGCCGCCGAAGCA GCAAAGACATGGGCGCTCGTGCCGCCCGACGTTATCACCGTGTTGCAGTCCATCGGCCTCGGCACCGCCCTTGGCATCGT CACCGCGGCCATCGCCATCCGCCTGGTGCTCCAGCTCATCCCGTTCGTGAGGTTGGGATCATGA
Upstream 100 bases:
>100_bases ACGACGTGAGCCCGCCTCCCATGGTGTGGTCGTTCATCCGTCTGTGCATCTTGATCACCGCGCTCTGGCTCGCGCGCGCA CTCGTGTTTGGAGGGTAAAA
Downstream 100 bases:
>100_bases TCAATTTGCTCGAAGGCGTCCCCGGGTCGGGGAAGAGCTATGAGGCCGTGGCCTACCACGTCATTCCGGCCCTTAAGTCC GGCCGCAAGGTCGTGACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MAEESSGIAAAISAVVKGIQKVVDKLDQFVDWFFELFPRMFKAGLTLLQDVFLWAFEQCLSLAKSALDGITGLDAMAAEA AKTWALVPPDVITVLQSIGLGTALGIVTAAIAIRLVLQLIPFVRLGS
Sequences:
>Translated_127_residues MAEESSGIAAAISAVVKGIQKVVDKLDQFVDWFFELFPRMFKAGLTLLQDVFLWAFEQCLSLAKSALDGITGLDAMAAEA AKTWALVPPDVITVLQSIGLGTALGIVTAAIAIRLVLQLIPFVRLGS >Mature_126_residues AEESSGIAAAISAVVKGIQKVVDKLDQFVDWFFELFPRMFKAGLTLLQDVFLWAFEQCLSLAKSALDGITGLDAMAAEAA KTWALVPPDVITVLQSIGLGTALGIVTAAIAIRLVLQLIPFVRLGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13535; Mature: 13404
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEESSGIAAAISAVVKGIQKVVDKLDQFVDWFFELFPRMFKAGLTLLQDVFLWAFEQCL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAKSALDGITGLDAMAAEAAKTWALVPPDVITVLQSIGLGTALGIVTAAIAIRLVLQLI HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH PFVRLGS HHHHCCC >Mature Secondary Structure AEESSGIAAAISAVVKGIQKVVDKLDQFVDWFFELFPRMFKAGLTLLQDVFLWAFEQCL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAKSALDGITGLDAMAAEAAKTWALVPPDVITVLQSIGLGTALGIVTAAIAIRLVLQLI HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH PFVRLGS HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA