Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120611063

Identifier: 120611063

GI number: 120611063

Start: 2614685

End: 2615047

Strand: Reverse

Name: 120611063

Synonym: Aave_2392

Alternate gene names: NA

Gene position: 2615047-2614685 (Counterclockwise)

Preceding gene: 120611070

Following gene: 120611059

Centisome position: 48.85

GC content: 63.91

Gene sequence:

>363_bases
TTGCATTGGTCAGGCCTTGGAAATCAGCTTGATCGCGAGGCTGATGCAGTAGCCGAGGAACCACCACAGGACCACGCTGC
CGGCGCCAAACACGTATGCCGCAGCCACCACCTCGGGTGTGAGGCCCAGGGCGGCGAAGTCCTCCGCCTGGGTGAAGCTC
AGCAAGGCTTGCTGATCGGGCGGGCACGGCGCCTGTGCGACGTTGCAAACGAGGATGTGCATGGTCAGCCGGTGAAGTCG
TCCAACATGCCGCCAGAGCCGCAGTCAGGGCAGACGAGCCAGTCCTCGCCGCCCGCGCTGTCGTCGCCATCGAAAAATTC
ATCCAGCGGGCCTTTGTGGTCGCAATGCGGGCATTCCGCCTGA

Upstream 100 bases:

>100_bases
CACTGCTGCAAAGATTGCGTCCATTTTCAAACTCCAGAAAAAAATCGGTGTTCCGGGGAATCCGGTTTGCACCCATCAAC
CCCGCACGCGAGGCTGATAG

Downstream 100 bases:

>100_bases
TCATCCATGGGTACCTCCCTCTGCCGTGCAAATGCACTCGGAGGCCCTCCCGGGCGGGAGGGCAACCGGCTGCACTCAGG
CGGCACGGGGAGCGGCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MHWSGLGNQLDREADAVAEEPPQDHAAGAKHVCRSHHLGCEAQGGEVLRLGEAQQGLLIGRARRLCDVANEDVHGQPVKS
SNMPPEPQSGQTSQSSPPALSSPSKNSSSGPLWSQCGHSA

Sequences:

>Translated_120_residues
MHWSGLGNQLDREADAVAEEPPQDHAAGAKHVCRSHHLGCEAQGGEVLRLGEAQQGLLIGRARRLCDVANEDVHGQPVKS
SNMPPEPQSGQTSQSSPPALSSPSKNSSSGPLWSQCGHSA
>Mature_120_residues
MHWSGLGNQLDREADAVAEEPPQDHAAGAKHVCRSHHLGCEAQGGEVLRLGEAQQGLLIGRARRLCDVANEDVHGQPVKS
SNMPPEPQSGQTSQSSPPALSSPSKNSSSGPLWSQCGHSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12593; Mature: 12593

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHWSGLGNQLDREADAVAEEPPQDHAAGAKHVCRSHHLGCEAQGGEVLRLGEAQQGLLIG
CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHH
RARRLCDVANEDVHGQPVKSSNMPPEPQSGQTSQSSPPALSSPSKNSSSGPLWSQCGHSA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure
MHWSGLGNQLDREADAVAEEPPQDHAAGAKHVCRSHHLGCEAQGGEVLRLGEAQQGLLIG
CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHH
RARRLCDVANEDVHGQPVKSSNMPPEPQSGQTSQSSPPALSSPSKNSSSGPLWSQCGHSA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA