Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611060
Identifier: 120611060
GI number: 120611060
Start: 2612603
End: 2613073
Strand: Direct
Name: 120611060
Synonym: Aave_2389
Alternate gene names: NA
Gene position: 2612603-2613073 (Clockwise)
Preceding gene: 120611058
Following gene: 120611061
Centisome position: 48.81
GC content: 67.73
Gene sequence:
>471_bases ATGAGGCTCGTCGCCAAGCACCACCAGGTTGGCTACCAGACCCCGGGAGAGCGGCCAGGCTGCCGCAACTGCGCGCACTT CGAGGTGACGCGCCATGACTCGCCCATCATCGCCCCGCGCACGGCCTGCACGCTGCACCAGCTCGAAGTGACCAGCGGCG GCATCTGCAATAGCCACAAGCTGCAGCGCAAGCCCGGCGAGGCCCAGCTCGCGTTCCTGGCCCGTCAGCGCGATCTGCTG GAGAGCCAGGCGCAGGACCTGGAGCCGCGCCTGGTCGATGACCGCGTGTTCCCCGCTGTGGGGGAGATGTACGAAGGCAA GCCGATGACGGTTGCCAAGCATCGCCGCCTGATGGTGGAGCAGTTGATCACCAACGAGGAAGCCTCTGGCGATCCTGATC TGCTGCGCGCCGCAGCGTTCCGCCGCCGCGCCAATGGCATGCCTCCCCGTCCTGGGGATCGTCGCGCATGA
Upstream 100 bases:
>100_bases CAGCTATTGCAGCGGCAAGCGGCAACAGCAATCCGAAGGCAAGTAACCCCATTTTTATCCCTCCCCAAAAAGGGGAACAT GGTAATGGCTGGGGTGAAGC
Downstream 100 bases:
>100_bases GCACCGCACCCATGGCCGGCTCGGCCCTTATCCACATGCCCAAGAGCTACGAGATTGCATGCCCGCCGGGCATGCTGGCC CACGGCCACCGCATCAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MRLVAKHHQVGYQTPGERPGCRNCAHFEVTRHDSPIIAPRTACTLHQLEVTSGGICNSHKLQRKPGEAQLAFLARQRDLL ESQAQDLEPRLVDDRVFPAVGEMYEGKPMTVAKHRRLMVEQLITNEEASGDPDLLRAAAFRRRANGMPPRPGDRRA
Sequences:
>Translated_156_residues MRLVAKHHQVGYQTPGERPGCRNCAHFEVTRHDSPIIAPRTACTLHQLEVTSGGICNSHKLQRKPGEAQLAFLARQRDLL ESQAQDLEPRLVDDRVFPAVGEMYEGKPMTVAKHRRLMVEQLITNEEASGDPDLLRAAAFRRRANGMPPRPGDRRA >Mature_156_residues MRLVAKHHQVGYQTPGERPGCRNCAHFEVTRHDSPIIAPRTACTLHQLEVTSGGICNSHKLQRKPGEAQLAFLARQRDLL ESQAQDLEPRLVDDRVFPAVGEMYEGKPMTVAKHRRLMVEQLITNEEASGDPDLLRAAAFRRRANGMPPRPGDRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17523; Mature: 17523
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVAKHHQVGYQTPGERPGCRNCAHFEVTRHDSPIIAPRTACTLHQLEVTSGGICNSHK CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHEEEEECCCCCCCCCCC LQRKPGEAQLAFLARQRDLLESQAQDLEPRLVDDRVFPAVGEMYEGKPMTVAKHRRLMVE CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHHHHHCCCCCHHHHHHHHHHH QLITNEEASGDPDLLRAAAFRRRANGMPPRPGDRRA HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRLVAKHHQVGYQTPGERPGCRNCAHFEVTRHDSPIIAPRTACTLHQLEVTSGGICNSHK CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHEEEEECCCCCCCCCCC LQRKPGEAQLAFLARQRDLLESQAQDLEPRLVDDRVFPAVGEMYEGKPMTVAKHRRLMVE CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHHHHHCCCCCHHHHHHHHHHH QLITNEEASGDPDLLRAAAFRRRANGMPPRPGDRRA HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA