Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120611056

Identifier: 120611056

GI number: 120611056

Start: 2610616

End: 2610876

Strand: Direct

Name: 120611056

Synonym: Aave_2385

Alternate gene names: NA

Gene position: 2610616-2610876 (Clockwise)

Preceding gene: 120611055

Following gene: 120611057

Centisome position: 48.77

GC content: 63.6

Gene sequence:

>261_bases
ATGATCCCATCCCTCAATATCGTCAAGGCTGGCTCCGGCATCTACGACGTGCACATTGAGGACGGCGGCACAGAAGTGGA
CGAGTTCACGGCAACGACCATCGCAGGCGCCATCCGGGAAGCGGCCGCCCGTGGGTACGGCGCCCGGGGCTTCCACATTT
GGTACGGCGCCATCTGCATCGGCACCACCACCCTGACCGCCATGCGGCACGATGCCGAAACGCTGGCGCTGAAGCTGCTG
AGCGTGGCATCACAGTTCTGA

Upstream 100 bases:

>100_bases
CGGACGGACGACGCGGCGCAACCCGTGTCGAGCGGCTTGCAGAGTTAGGCTTCGCCATCACCAGTGTGGAGGAGGTGGAA
GCCCCCGCCGAGGATGCCGA

Downstream 100 bases:

>100_bases
GGGCGGCATGAAGAATTCCGGAATGTTCGCCCAGGCTCTCCAGCATGCCTTCTGGATGCAGTCCGTCCGCGCACATGAGA
ACCCGAAACAGGTGGCACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MIPSLNIVKAGSGIYDVHIEDGGTEVDEFTATTIAGAIREAAARGYGARGFHIWYGAICIGTTTLTAMRHDAETLALKLL
SVASQF

Sequences:

>Translated_86_residues
MIPSLNIVKAGSGIYDVHIEDGGTEVDEFTATTIAGAIREAAARGYGARGFHIWYGAICIGTTTLTAMRHDAETLALKLL
SVASQF
>Mature_86_residues
MIPSLNIVKAGSGIYDVHIEDGGTEVDEFTATTIAGAIREAAARGYGARGFHIWYGAICIGTTTLTAMRHDAETLALKLL
SVASQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9085; Mature: 9085

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPSLNIVKAGSGIYDVHIEDGGTEVDEFTATTIAGAIREAAARGYGARGFHIWYGAICI
CCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHH
GTTTLTAMRHDAETLALKLLSVASQF
HHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPSLNIVKAGSGIYDVHIEDGGTEVDEFTATTIAGAIREAAARGYGARGFHIWYGAICI
CCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHH
GTTTLTAMRHDAETLALKLLSVASQF
HHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA