Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611052
Identifier: 120611052
GI number: 120611052
Start: 2597711
End: 2599270
Strand: Direct
Name: 120611052
Synonym: Aave_2381
Alternate gene names: NA
Gene position: 2597711-2599270 (Clockwise)
Preceding gene: 120611051
Following gene: 120611054
Centisome position: 48.53
GC content: 65.71
Gene sequence:
>1560_bases ATGGCAGCACCACGCGGCGGACTGGCGGCAGGTATCCTGCAGGGCCAGCAGATTTTTCAGAACTTCCACGGGCAGTTCCA GCAGGCACAGCAGCAGCGTGCGCTTGATGAAGTGGCGAGCGCGCGGCCCGTGGAATCTACAGGCTTCACGGCAGACCAGG GCCAGCAGCTGGAAAGTCTGGCGAAGCAGGGTTTCGACAACATCACATTCGATGACGGCGCGAAGGCCTATGTGGCGAAG AACTCGGCCGGCGAGGCCCGGACGGTGGCCATGCAGGGCGTCACCGACTTCTTGGGCGAGCGTACTGCCGGCAGCATGGG CCGCGATCAGCAGGACAACCTGCGTATGCGGGCAATGGCGGACGCCATCGGTCGGACCGATCCTGCCCGCGGCCTGCAAA TGAGCCTGCAGGCGCAGCAGGGGCTGTTCGCCGCGCGCAAGCAGGGGCGAGAGGAGAAACAGTGGGCGCGCGAGGACGGC GTGGAGCGGATCGACGCGGAGATGGGGGCGAAGCTGAAGCAGGCTCTCGTGGGCCCGGATGGTCAACCGCGGCAAGCCAC GGCGGACGACTACCTGGCGAACACGCGGGAACGCGCACTGGCGCTTGCTCAGGCGGGCTATGCCAAGGAAGCGGATCAAG CGGCCAAGGACCACATGGCGCAGAGTCACATCCAGATCCAGCTGCAGGCGGCGGCCCGCAAGGAGGCTGCAGGGAAGGCC GCCGCGGCGCTGGCTGCGGGCGACTACACCCAGCTGGCCGACGTCTACAACCGGTTCGTGCCCAGCGGCGATAAGGTGAC GGGCATCGAGGCGGGGAAGGACGGGCAGCTGTTGGTGCAGCGCACGGGGCTGGACGGGAAGCCGATGCCGCCTATCACGC TCAAAGACCGCGGCGAGGCGCTGGCCATGCTGAAGGCGCTGGACGATCCGATGGCGCTCTACCAATACAGCCAGCACGAG CTGCTGAACCAACTGCGGCTGCGCGCTGAGGCCCGCGCGGACAATGCTGATCGCCGAGCCGACAACGCCGACGGCCGGGC GGCGGCGGCGCACGGCTTGGCCATGGCTGACCGGGGTGAGCGCCTGGCTGAGAAGCGCGAACTTCGCGACGTGCGCGAGG CGCTGGCACGGGAGACCGATCCGAAGATGACGCCGACCCAACTGCGCGCGGTGCGTGCGGGCATCCTGCAAACCCCTGGC TCGGACACTTCCAAGCTGAAGTACGACTACGACCCCACCAAAGTGCAGAAGGCGTTCGGAGAAACGTCCACCGACCCGCT TTCTGGGAAGGAGAAGGTCAAGCGGAACCCGGCCGCGGAACAGGAGTTCCAGGAATTCATGGCGGACAACCCCTCCATCC GGGACACAGACGAGGGCCTGGTGCGTTTCAATCGCGCGAAGGTCCAGAAAGACCGCGCCTCGCGCCAAGCCGGCGACGCT GTCAAGGCCCAGGTGCGAAATGCCATGTCTCAGGAAAACCTCGACGCCACGGCCAAAAAATATGGCATGACGGTGGACGA GGTAATCAAGGAACTGCAGAAGCAGGGCATTTCAAAATAA
Upstream 100 bases:
>100_bases CCGAGGTGCTGCCGGAATACAGGATTGGCCTGCAAACGATCCGCGCTGAACTGGCGCGGCGGATGCAGGAGTTGGACGAC GAACTTTCGGAGGCGGAGTA
Downstream 100 bases:
>100_bases TCCCTGCCGATCCAAGCTGGCGGTTATTTGGCGGAGCTGGAGATGTCGGCCAGTACCCGCTTGTGGGCTTCGATGAGGAA CCACGACATTTTCTGATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MAAPRGGLAAGILQGQQIFQNFHGQFQQAQQQRALDEVASARPVESTGFTADQGQQLESLAKQGFDNITFDDGAKAYVAK NSAGEARTVAMQGVTDFLGERTAGSMGRDQQDNLRMRAMADAIGRTDPARGLQMSLQAQQGLFAARKQGREEKQWAREDG VERIDAEMGAKLKQALVGPDGQPRQATADDYLANTRERALALAQAGYAKEADQAAKDHMAQSHIQIQLQAAARKEAAGKA AAALAAGDYTQLADVYNRFVPSGDKVTGIEAGKDGQLLVQRTGLDGKPMPPITLKDRGEALAMLKALDDPMALYQYSQHE LLNQLRLRAEARADNADRRADNADGRAAAAHGLAMADRGERLAEKRELRDVREALARETDPKMTPTQLRAVRAGILQTPG SDTSKLKYDYDPTKVQKAFGETSTDPLSGKEKVKRNPAAEQEFQEFMADNPSIRDTDEGLVRFNRAKVQKDRASRQAGDA VKAQVRNAMSQENLDATAKKYGMTVDEVIKELQKQGISK
Sequences:
>Translated_519_residues MAAPRGGLAAGILQGQQIFQNFHGQFQQAQQQRALDEVASARPVESTGFTADQGQQLESLAKQGFDNITFDDGAKAYVAK NSAGEARTVAMQGVTDFLGERTAGSMGRDQQDNLRMRAMADAIGRTDPARGLQMSLQAQQGLFAARKQGREEKQWAREDG VERIDAEMGAKLKQALVGPDGQPRQATADDYLANTRERALALAQAGYAKEADQAAKDHMAQSHIQIQLQAAARKEAAGKA AAALAAGDYTQLADVYNRFVPSGDKVTGIEAGKDGQLLVQRTGLDGKPMPPITLKDRGEALAMLKALDDPMALYQYSQHE LLNQLRLRAEARADNADRRADNADGRAAAAHGLAMADRGERLAEKRELRDVREALARETDPKMTPTQLRAVRAGILQTPG SDTSKLKYDYDPTKVQKAFGETSTDPLSGKEKVKRNPAAEQEFQEFMADNPSIRDTDEGLVRFNRAKVQKDRASRQAGDA VKAQVRNAMSQENLDATAKKYGMTVDEVIKELQKQGISK >Mature_518_residues AAPRGGLAAGILQGQQIFQNFHGQFQQAQQQRALDEVASARPVESTGFTADQGQQLESLAKQGFDNITFDDGAKAYVAKN SAGEARTVAMQGVTDFLGERTAGSMGRDQQDNLRMRAMADAIGRTDPARGLQMSLQAQQGLFAARKQGREEKQWAREDGV ERIDAEMGAKLKQALVGPDGQPRQATADDYLANTRERALALAQAGYAKEADQAAKDHMAQSHIQIQLQAAARKEAAGKAA AALAAGDYTQLADVYNRFVPSGDKVTGIEAGKDGQLLVQRTGLDGKPMPPITLKDRGEALAMLKALDDPMALYQYSQHEL LNQLRLRAEARADNADRRADNADGRAAAAHGLAMADRGERLAEKRELRDVREALARETDPKMTPTQLRAVRAGILQTPGS DTSKLKYDYDPTKVQKAFGETSTDPLSGKEKVKRNPAAEQEFQEFMADNPSIRDTDEGLVRFNRAKVQKDRASRQAGDAV KAQVRNAMSQENLDATAKKYGMTVDEVIKELQKQGISK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56468; Mature: 56337
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPRGGLAAGILQGQQIFQNFHGQFQQAQQQRALDEVASARPVESTGFTADQGQQLESL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH AKQGFDNITFDDGAKAYVAKNSAGEARTVAMQGVTDFLGERTAGSMGRDQQDNLRMRAMA HHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH DAIGRTDPARGLQMSLQAQQGLFAARKQGREEKQWAREDGVERIDAEMGAKLKQALVGPD HHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GQPRQATADDYLANTRERALALAQAGYAKEADQAAKDHMAQSHIQIQLQAAARKEAAGKA CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH AAALAAGDYTQLADVYNRFVPSGDKVTGIEAGKDGQLLVQRTGLDGKPMPPITLKDRGEA HHHHHCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCEECCCHHH LAMLKALDDPMALYQYSQHELLNQLRLRAEARADNADRRADNADGRAAAAHGLAMADRGE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHH RLAEKRELRDVREALARETDPKMTPTQLRAVRAGILQTPGSDTSKLKYDYDPTKVQKAFG HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHC ETSTDPLSGKEKVKRNPAAEQEFQEFMADNPSIRDTDEGLVRFNRAKVQKDRASRQAGDA CCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VKAQVRNAMSQENLDATAKKYGMTVDEVIKELQKQGISK HHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHCCCCC >Mature Secondary Structure AAPRGGLAAGILQGQQIFQNFHGQFQQAQQQRALDEVASARPVESTGFTADQGQQLESL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH AKQGFDNITFDDGAKAYVAKNSAGEARTVAMQGVTDFLGERTAGSMGRDQQDNLRMRAMA HHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH DAIGRTDPARGLQMSLQAQQGLFAARKQGREEKQWAREDGVERIDAEMGAKLKQALVGPD HHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GQPRQATADDYLANTRERALALAQAGYAKEADQAAKDHMAQSHIQIQLQAAARKEAAGKA CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH AAALAAGDYTQLADVYNRFVPSGDKVTGIEAGKDGQLLVQRTGLDGKPMPPITLKDRGEA HHHHHCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCEECCCHHH LAMLKALDDPMALYQYSQHELLNQLRLRAEARADNADRRADNADGRAAAAHGLAMADRGE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHH RLAEKRELRDVREALARETDPKMTPTQLRAVRAGILQTPGSDTSKLKYDYDPTKVQKAFG HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHC ETSTDPLSGKEKVKRNPAAEQEFQEFMADNPSIRDTDEGLVRFNRAKVQKDRASRQAGDA CCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VKAQVRNAMSQENLDATAKKYGMTVDEVIKELQKQGISK HHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA