Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611048
Identifier: 120611048
GI number: 120611048
Start: 2593960
End: 2595000
Strand: Direct
Name: 120611048
Synonym: Aave_2377
Alternate gene names: NA
Gene position: 2593960-2595000 (Clockwise)
Preceding gene: 120611047
Following gene: 120611049
Centisome position: 48.46
GC content: 52.07
Gene sequence:
>1041_bases ATGGGATCTGGACTGAGCCGAATCATTGCCAACCATGACCAGTCGATAGAAGAGGGCTACGAAGCAGTTGTGAAGTTTGG GCGGCGTTCGTACGCTGTTTCAAATCTCCGCGGAGGCATTGGTAAATCCACTCTCAGTTTCAACTTGGCATGGCTTTTCA CCCGTCACTACGCCACGTTGGTTGCTGACCTGTGTCCACAAAAGAACTTGACCGAATCTCTGATGCGCGGTCAGAAAGCG GAAATCACAATTGGCGATGCACTGCGCCCAAAGGTGCTGGGTCCTGCATTTGGAGAAGTTCCGGAGGATATTTCTTACCG TATTAGCAACTTCAACGATCATTTTAAAGGGGCTAAATCCGGGTATTTTGTGCCGGGCGATGGGCAGCTTTTTTCCTTCC CCTCTGCGCTATATCAGCAGCTCCAGCAGGCCATGGCGTCGAGCAATGAAAAAGCCGTGAGAAACATCCTACTGAGCCTG AAAGGTGTGTTGAACGACGAGGCAGAATCGAAGAGTTGCAGCAAGATTCTGATGGATTGCAGCCCTTTCTATGGCGGCGG TACTCATCTGGCATGGTGCGCCGCTGACGCGCTCATCATCCCTGTCCGTGTGGACGAGCACTCAATCGAGTCTTTAGATA TCACGCTTGACATGCTCTCAAACCCTGCCAGCGACTTTAACGTCTGGGGGGCGAGGGCCGGTGGCATGGAAACTCCCAAG GTCGCGGCAATTGTTATGACAATGGTGGGCGCCCGGAGTCCTAAAAAAGGGGTCAAAGACCGCGCATCGCAAATGTATGT GGAACGTGCGTATGGCACCGCGGCCAAGTATCCACATCTGTTCGACGTGGAAGATCCGGCCGATGCTTTCGTAATCACCG ACGACTTCATGTCTGCAGGTCGCATCAGTGGGGCAGAAGGTATTCCCATTCCAAAATTGAAGGTAGGACAGTTCCACACT GTTAACGGTAGTCGTCTGCAGGTAAATCAATCACAAACCAAGTACCGCAAGGAACTGGAGTATTTGGCTGCCGTCCTATA A
Upstream 100 bases:
>100_bases AGATCGACCTGCAGCTTTCGTGACGGCCTGCGGAAAAGTTGACGTCCTGCGAGATTTTTTGTAACCTGCAGCATCTTCAA CGACCTGCGGGGAATTTTTT
Downstream 100 bases:
>100_bases GTAGCTTTCCGCTTCGCAAAGCCCGCTTCCGCGGGCTTTGTTGTTTCTGGGCTCCGTACCAAGCCTGCCACCCTGCGGGC ATGACTGTTCACGCGCTGGA
Product: chromosome partitioning ATPase
Products: NA
Alternate protein names: ATPase Involved In Chromosome Partitioning-Like Protein; ATPase; ParA Protein; ATPase Domain Protein
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MGSGLSRIIANHDQSIEEGYEAVVKFGRRSYAVSNLRGGIGKSTLSFNLAWLFTRHYATLVADLCPQKNLTESLMRGQKA EITIGDALRPKVLGPAFGEVPEDISYRISNFNDHFKGAKSGYFVPGDGQLFSFPSALYQQLQQAMASSNEKAVRNILLSL KGVLNDEAESKSCSKILMDCSPFYGGGTHLAWCAADALIIPVRVDEHSIESLDITLDMLSNPASDFNVWGARAGGMETPK VAAIVMTMVGARSPKKGVKDRASQMYVERAYGTAAKYPHLFDVEDPADAFVITDDFMSAGRISGAEGIPIPKLKVGQFHT VNGSRLQVNQSQTKYRKELEYLAAVL
Sequences:
>Translated_346_residues MGSGLSRIIANHDQSIEEGYEAVVKFGRRSYAVSNLRGGIGKSTLSFNLAWLFTRHYATLVADLCPQKNLTESLMRGQKA EITIGDALRPKVLGPAFGEVPEDISYRISNFNDHFKGAKSGYFVPGDGQLFSFPSALYQQLQQAMASSNEKAVRNILLSL KGVLNDEAESKSCSKILMDCSPFYGGGTHLAWCAADALIIPVRVDEHSIESLDITLDMLSNPASDFNVWGARAGGMETPK VAAIVMTMVGARSPKKGVKDRASQMYVERAYGTAAKYPHLFDVEDPADAFVITDDFMSAGRISGAEGIPIPKLKVGQFHT VNGSRLQVNQSQTKYRKELEYLAAVL >Mature_345_residues GSGLSRIIANHDQSIEEGYEAVVKFGRRSYAVSNLRGGIGKSTLSFNLAWLFTRHYATLVADLCPQKNLTESLMRGQKAE ITIGDALRPKVLGPAFGEVPEDISYRISNFNDHFKGAKSGYFVPGDGQLFSFPSALYQQLQQAMASSNEKAVRNILLSLK GVLNDEAESKSCSKILMDCSPFYGGGTHLAWCAADALIIPVRVDEHSIESLDITLDMLSNPASDFNVWGARAGGMETPKV AAIVMTMVGARSPKKGVKDRASQMYVERAYGTAAKYPHLFDVEDPADAFVITDDFMSAGRISGAEGIPIPKLKVGQFHTV NGSRLQVNQSQTKYRKELEYLAAVL
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37713; Mature: 37582
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSGLSRIIANHDQSIEEGYEAVVKFGRRSYAVSNLRGGIGKSTLSFNLAWLFTRHYATL CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH VADLCPQKNLTESLMRGQKAEITIGDALRPKVLGPAFGEVPEDISYRISNFNDHFKGAKS HHHHCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCHHCCCCCC GYFVPGDGQLFSFPSALYQQLQQAMASSNEKAVRNILLSLKGVLNDEAESKSCSKILMDC CEEECCCCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC SPFYGGGTHLAWCAADALIIPVRVDEHSIESLDITLDMLSNPASDFNVWGARAGGMETPK CCCCCCCCCHHEEECCEEEEEEEECCCCCCHHEEEHHHHCCCCCCCCCCCCCCCCCCCHH VAAIVMTMVGARSPKKGVKDRASQMYVERAYGTAAKYPHLFDVEDPADAFVITDDFMSAG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHCCCEEECCCCCCCEEEEEHHHHCCC RISGAEGIPIPKLKVGQFHTVNGSRLQVNQSQTKYRKELEYLAAVL CCCCCCCCCCCCEECCCEEECCCCEEEECHHHHHHHHHHHHHHHHC >Mature Secondary Structure GSGLSRIIANHDQSIEEGYEAVVKFGRRSYAVSNLRGGIGKSTLSFNLAWLFTRHYATL CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH VADLCPQKNLTESLMRGQKAEITIGDALRPKVLGPAFGEVPEDISYRISNFNDHFKGAKS HHHHCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCHHCCCCCC GYFVPGDGQLFSFPSALYQQLQQAMASSNEKAVRNILLSLKGVLNDEAESKSCSKILMDC CEEECCCCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC SPFYGGGTHLAWCAADALIIPVRVDEHSIESLDITLDMLSNPASDFNVWGARAGGMETPK CCCCCCCCCHHEEECCEEEEEEEECCCCCCHHEEEHHHHCCCCCCCCCCCCCCCCCCCHH VAAIVMTMVGARSPKKGVKDRASQMYVERAYGTAAKYPHLFDVEDPADAFVITDDFMSAG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHCCCEEECCCCCCCEEEEEHHHHCCC RISGAEGIPIPKLKVGQFHTVNGSRLQVNQSQTKYRKELEYLAAVL CCCCCCCCCCCCEECCCEEECCCCEEEECHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA