Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611036
Identifier: 120611036
GI number: 120611036
Start: 2581515
End: 2582630
Strand: Direct
Name: 120611036
Synonym: Aave_2365
Alternate gene names: NA
Gene position: 2581515-2582630 (Clockwise)
Preceding gene: 120611035
Following gene: 120611037
Centisome position: 48.23
GC content: 65.95
Gene sequence:
>1116_bases ATGGCGAAAACCAGCACGGGCGTGAACAGCCCGCGTGCCGTCAAGCGCTTCTCCGGCGACTTGGCCCTCGATGTGTCCCA GCAGTCCTATTTCGGCCGCCGTTTCGCGGCCGTCGGCCAGGGCGCGAAGACCCCCATCCAGATCCTCACGGAACTGGAAT CCGAGGCCGGTGAACTCATCACCTACGACCTGCTGACCGAACTGCGCATGGCGCCGGTCGAAGGTGACAACACCCTCACC GGCAAGGAAGAAGCGCAGAAGTTCTACAGCGATGAGCTGTATATCGACCAGGCCCGCGCCGGCGTGAACACCGGCGGCCG TATGTCGCGCAAGCGCACGCTGCACGATCTGCGCATGCGGGCCAAGCAGCAGCAGGCTGGCTGGTGGGGCCGCTTCCAGG ACGAACTGTCGTTCTCCTACCTCTCGGGCTCGCGCGGCGTGAACGAGAACTTCCTGCTGCCGCTGGGCTACCAAGGCCGG GCGAACAACAAGCTGACCGCTCCCACGGTCAACCACCAGCTGTTCGCAGGCGACGCCACCAGCACGGCCAACATCGACGC CACCGACAAGATGACGCTGAAGCTCGTGGGCGACGCACGCACCCGTGCCGACACTCAGGGCGGCGGCTCCACCAACATCC CGGTTCTGCAGCCGTGCGTGGTGGACGGCGAGGAGGTCTTCGTCATGGTGATGCACACCTGGCACGAGGACGACCTGCGC AACGACACTTCCACGGGCGCGTGGATGGATTTGCAGAAGGCGGCCGCCGCATCGCTCGGCGCGAAGTCTCCGCTGTTCCG ATCGGCCCTCGGCATGCACCGCAACGTGGTGCTGCACAGCCATCGCAACGTCATCCGCCACAACAACCACGGCGCGGGCG GCAACGTGTCCACCGCGCGCGCTCTCTTCATGGGCGCACAGGCGGGGGTGCTGGCGTTTGGCAGCCCGGGCACCGGCATG CGCTACGGCTGGCACGAAGAAACCCGCGACAACGGGAACCAGGTGGTCATCACCACGTCCTCCATCTTCGGCTTCAAGAA GACCACGTTCAACTGGGACGGCGTGAGCCACGACCAAGGCCTGTTCGCCGTGGATGCCGCTGCAGCCCCCCGCTGA
Upstream 100 bases:
>100_bases TCAAGAAGGTGCCGGCCCGTACCAAGCCTGCCATCGTGAAAGCCTGAAGTTTTTTTCAACCGGGGCGCTGGAGTGCTCGC ATCCTCTCTAGGAGCATTCC
Downstream 100 bases:
>100_bases TCCGGTCCCCCCTGAAACCATAGAAGGAGTCGAACATGCCTTTCGCCAACAAGAGCCCCCAACTGGCGGGCTATGACAAC GCCATCACCCCCGGCGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MAKTSTGVNSPRAVKRFSGDLALDVSQQSYFGRRFAAVGQGAKTPIQILTELESEAGELITYDLLTELRMAPVEGDNTLT GKEEAQKFYSDELYIDQARAGVNTGGRMSRKRTLHDLRMRAKQQQAGWWGRFQDELSFSYLSGSRGVNENFLLPLGYQGR ANNKLTAPTVNHQLFAGDATSTANIDATDKMTLKLVGDARTRADTQGGGSTNIPVLQPCVVDGEEVFVMVMHTWHEDDLR NDTSTGAWMDLQKAAAASLGAKSPLFRSALGMHRNVVLHSHRNVIRHNNHGAGGNVSTARALFMGAQAGVLAFGSPGTGM RYGWHEETRDNGNQVVITTSSIFGFKKTTFNWDGVSHDQGLFAVDAAAAPR
Sequences:
>Translated_371_residues MAKTSTGVNSPRAVKRFSGDLALDVSQQSYFGRRFAAVGQGAKTPIQILTELESEAGELITYDLLTELRMAPVEGDNTLT GKEEAQKFYSDELYIDQARAGVNTGGRMSRKRTLHDLRMRAKQQQAGWWGRFQDELSFSYLSGSRGVNENFLLPLGYQGR ANNKLTAPTVNHQLFAGDATSTANIDATDKMTLKLVGDARTRADTQGGGSTNIPVLQPCVVDGEEVFVMVMHTWHEDDLR NDTSTGAWMDLQKAAAASLGAKSPLFRSALGMHRNVVLHSHRNVIRHNNHGAGGNVSTARALFMGAQAGVLAFGSPGTGM RYGWHEETRDNGNQVVITTSSIFGFKKTTFNWDGVSHDQGLFAVDAAAAPR >Mature_370_residues AKTSTGVNSPRAVKRFSGDLALDVSQQSYFGRRFAAVGQGAKTPIQILTELESEAGELITYDLLTELRMAPVEGDNTLTG KEEAQKFYSDELYIDQARAGVNTGGRMSRKRTLHDLRMRAKQQQAGWWGRFQDELSFSYLSGSRGVNENFLLPLGYQGRA NNKLTAPTVNHQLFAGDATSTANIDATDKMTLKLVGDARTRADTQGGGSTNIPVLQPCVVDGEEVFVMVMHTWHEDDLRN DTSTGAWMDLQKAAAASLGAKSPLFRSALGMHRNVVLHSHRNVIRHNNHGAGGNVSTARALFMGAQAGVLAFGSPGTGMR YGWHEETRDNGNQVVITTSSIFGFKKTTFNWDGVSHDQGLFAVDAAAAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40355; Mature: 40223
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTSTGVNSPRAVKRFSGDLALDVSQQSYFGRRFAAVGQGAKTPIQILTELESEAGELI CCCCCCCCCCCHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEE TYDLLTELRMAPVEGDNTLTGKEEAQKFYSDELYIDQARAGVNTGGRMSRKRTLHDLRMR EHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHH AKQQQAGWWGRFQDELSFSYLSGSRGVNENFLLPLGYQGRANNKLTAPTVNHQLFAGDAT HHHHHCCCCCCCHHHHEEEEECCCCCCCCCEEEEECCCCCCCCEEECCCCCCEEEECCCC STANIDATDKMTLKLVGDARTRADTQGGGSTNIPVLQPCVVDGEEVFVMVMHTWHEDDLR CCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCEECCEEECCCEEEEEEEECCCCHHHC NDTSTGAWMDLQKAAAASLGAKSPLFRSALGMHRNVVLHSHRNVIRHNNHGAGGNVSTAR CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCHHHHCCCCCCCCCCHHHH ALFMGAQAGVLAFGSPGTGMRYGWHEETRDNGNQVVITTSSIFGFKKTTFNWDGVSHDQG HHHHCCCCCEEEECCCCCCCCCCCCCHHCCCCCEEEEEECCCCCEEECEECCCCCCCCCC LFAVDAAAAPR EEEEECCCCCC >Mature Secondary Structure AKTSTGVNSPRAVKRFSGDLALDVSQQSYFGRRFAAVGQGAKTPIQILTELESEAGELI CCCCCCCCCCHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEE TYDLLTELRMAPVEGDNTLTGKEEAQKFYSDELYIDQARAGVNTGGRMSRKRTLHDLRMR EHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHH AKQQQAGWWGRFQDELSFSYLSGSRGVNENFLLPLGYQGRANNKLTAPTVNHQLFAGDAT HHHHHCCCCCCCHHHHEEEEECCCCCCCCCEEEEECCCCCCCCEEECCCCCCEEEECCCC STANIDATDKMTLKLVGDARTRADTQGGGSTNIPVLQPCVVDGEEVFVMVMHTWHEDDLR CCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCEECCEEECCCEEEEEEEECCCCHHHC NDTSTGAWMDLQKAAAASLGAKSPLFRSALGMHRNVVLHSHRNVIRHNNHGAGGNVSTAR CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCHHHHCCCCCCCCCCHHHH ALFMGAQAGVLAFGSPGTGMRYGWHEETRDNGNQVVITTSSIFGFKKTTFNWDGVSHDQG HHHHCCCCCEEEECCCCCCCCCCCCCHHCCCCCEEEEEECCCCCEEECEECCCCCCCCCC LFAVDAAAAPR EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA