Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611019
Identifier: 120611019
GI number: 120611019
Start: 2569499
End: 2569990
Strand: Direct
Name: 120611019
Synonym: Aave_2348
Alternate gene names: NA
Gene position: 2569499-2569990 (Clockwise)
Preceding gene: 120611018
Following gene: 120611020
Centisome position: 48.0
GC content: 70.12
Gene sequence:
>492_bases ATGCGCCGCACTGGGTTTCGCCGCGCGCCCCGGCCGGCCGCTCCGGCACCTGATCGCGAGGTGCGCCTGGCCGCCCGCGC TGCGCGCGCCATGGCGGAGGTGACGCCACGGGCGGCGGTGCACGCGCCGTGTGGTTCGCCAGCGCTCGCGGTGCCCAAGA CTGTGTTCGTGCGCAGCCGCCTCTACCGGCACCTGGTGGCCCAGCTGCCCTGCAAGTTCTGTGGCGTGCCCGGGCTGAGC CAGTGTGCGCACGCGAACACGGGCAAGGGCGCATCGCTCAAGGTGTGCGACCTCGAGAGCTTCCCTCTCTGCATGGACCG GCCCGGCGTGCGCGGTTGCCATGCGCTGTTCGATCAGGGGGCTTTGTTCACGAAGCTGGCTCGCCGTGAGATCGAACGCG CCTGGGTAGCGGACACCCAACGGCAGATTTGGGCGCTGGGGCTTTGGCCGAAGTCCCTGCGGACGCCTGTTTTCGTGGAC CTTCCTTCCTGA
Upstream 100 bases:
>100_bases TCCGCTTCCAGCGGCAGATCAACGCCAACCTGGTGGAGCGCGCGCGAAAGGAGCTGGAACGGCTCAAGGCGGCAGAGCAG GGCGGCGGAGGTGCAGCGTG
Downstream 100 bases:
>100_bases TGACGATGAATGACCCCATGGATTGGCTGGCGGCCCAGATTGGTGCCCGCCAGGAACCCCCGCGTCCGCAGCACACGAAC CCTCGGCCGGCCGGCGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MRRTGFRRAPRPAAPAPDREVRLAARAARAMAEVTPRAAVHAPCGSPALAVPKTVFVRSRLYRHLVAQLPCKFCGVPGLS QCAHANTGKGASLKVCDLESFPLCMDRPGVRGCHALFDQGALFTKLARREIERAWVADTQRQIWALGLWPKSLRTPVFVD LPS
Sequences:
>Translated_163_residues MRRTGFRRAPRPAAPAPDREVRLAARAARAMAEVTPRAAVHAPCGSPALAVPKTVFVRSRLYRHLVAQLPCKFCGVPGLS QCAHANTGKGASLKVCDLESFPLCMDRPGVRGCHALFDQGALFTKLARREIERAWVADTQRQIWALGLWPKSLRTPVFVD LPS >Mature_163_residues MRRTGFRRAPRPAAPAPDREVRLAARAARAMAEVTPRAAVHAPCGSPALAVPKTVFVRSRLYRHLVAQLPCKFCGVPGLS QCAHANTGKGASLKVCDLESFPLCMDRPGVRGCHALFDQGALFTKLARREIERAWVADTQRQIWALGLWPKSLRTPVFVD LPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17865; Mature: 17865
Theoretical pI: Translated: 11.36; Mature: 11.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTGFRRAPRPAAPAPDREVRLAARAARAMAEVTPRAAVHAPCGSPALAVPKTVFVRSR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHH LYRHLVAQLPCKFCGVPGLSQCAHANTGKGASLKVCDLESFPLCMDRPGVRGCHALFDQG HHHHHHHHCCHHHCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCC ALFTKLARREIERAWVADTQRQIWALGLWPKSLRTPVFVDLPS HHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCEEEECCC >Mature Secondary Structure MRRTGFRRAPRPAAPAPDREVRLAARAARAMAEVTPRAAVHAPCGSPALAVPKTVFVRSR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHH LYRHLVAQLPCKFCGVPGLSQCAHANTGKGASLKVCDLESFPLCMDRPGVRGCHALFDQG HHHHHHHHCCHHHCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCC ALFTKLARREIERAWVADTQRQIWALGLWPKSLRTPVFVDLPS HHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA