Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611017
Identifier: 120611017
GI number: 120611017
Start: 2568775
End: 2569239
Strand: Direct
Name: 120611017
Synonym: Aave_2346
Alternate gene names: NA
Gene position: 2568775-2569239 (Clockwise)
Preceding gene: 120611016
Following gene: 120611018
Centisome position: 47.99
GC content: 69.03
Gene sequence:
>465_bases ATGGTGCGTGAATTCGATCGCTGGCTGTTGGCGCAGCACCAGCACGTCGTGGACTGGGTGCAGCGCAGCCCCGGATGGCT CTCCGAGCAGTGCGCGCTCATGATGGCCGTGCTGACGCTGGTTGGCGCTGCGCTGGAGCAGGATTGGGGAGCTGTGGGCC TGGCGCTGGTCGGGCTCTCTCTGGGCTGCATCGTGGTCCTGTTCCTCGTGGCGCGCGAACCCGTAGTGCTCGCCGCCATG GGGGCCAGGAGCGGCCTGCGTTGGGGGCTTCTGGCCTTGCTGCTGGTCCGCCTGACGTTGCTGGTGCTGCTACTCGCATC TGGCTTGGAGGTCCGGCGGTACATGCTGTTCAGCGTCGTCAGCGGCGTGGGGCTGGTGGCCTACGTCTACTTCGCGGCGT GCCGTCCCCCGCGGCCACGGTTGCCTCGGCAGCGCATCGCGGCCGCCTCGGGGGCTGCTCGATGA
Upstream 100 bases:
>100_bases GCGGCGACAGAGCTGGGCGTCATCTTCCCAGCGACGTTCGACCAGTGGGAGCAGATGAACGTCGATCCGGACACCGGAGA AATCTTGGGAGGTATGACGA
Downstream 100 bases:
>100_bases CCGACACGGAGCTGACCTTCACAACCGCGCTGGCCCGCGTCAAGTTCCCGCCGCGCTGCAGCTGCTTGAAGTTCGTGGAT TCGATGGTCTGGTTCTCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MVREFDRWLLAQHQHVVDWVQRSPGWLSEQCALMMAVLTLVGAALEQDWGAVGLALVGLSLGCIVVLFLVAREPVVLAAM GARSGLRWGLLALLLVRLTLLVLLLASGLEVRRYMLFSVVSGVGLVAYVYFAACRPPRPRLPRQRIAAASGAAR
Sequences:
>Translated_154_residues MVREFDRWLLAQHQHVVDWVQRSPGWLSEQCALMMAVLTLVGAALEQDWGAVGLALVGLSLGCIVVLFLVAREPVVLAAM GARSGLRWGLLALLLVRLTLLVLLLASGLEVRRYMLFSVVSGVGLVAYVYFAACRPPRPRLPRQRIAAASGAAR >Mature_154_residues MVREFDRWLLAQHQHVVDWVQRSPGWLSEQCALMMAVLTLVGAALEQDWGAVGLALVGLSLGCIVVLFLVAREPVVLAAM GARSGLRWGLLALLLVRLTLLVLLLASGLEVRRYMLFSVVSGVGLVAYVYFAACRPPRPRLPRQRIAAASGAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16788; Mature: 16788
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVREFDRWLLAQHQHVVDWVQRSPGWLSEQCALMMAVLTLVGAALEQDWGAVGLALVGLS CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGCIVVLFLVAREPVVLAAMGARSGLRWGLLALLLVRLTLLVLLLASGLEVRRYMLFSVV HHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SGVGLVAYVYFAACRPPRPRLPRQRIAAASGAAR HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MVREFDRWLLAQHQHVVDWVQRSPGWLSEQCALMMAVLTLVGAALEQDWGAVGLALVGLS CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGCIVVLFLVAREPVVLAAMGARSGLRWGLLALLLVRLTLLVLLLASGLEVRRYMLFSVV HHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SGVGLVAYVYFAACRPPRPRLPRQRIAAASGAAR HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA