Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610980
Identifier: 120610980
GI number: 120610980
Start: 2534190
End: 2535170
Strand: Direct
Name: 120610980
Synonym: Aave_2307
Alternate gene names: NA
Gene position: 2534190-2535170 (Clockwise)
Preceding gene: 120610979
Following gene: 120610981
Centisome position: 47.34
GC content: 74.31
Gene sequence:
>981_bases ATGCCCGATTCCGATCCCCAGGATTTCCGCCCGCCGTCCTCTTTGCCGCGCCGCGCATCGCCCGTGGGCTGGGTACTGGC GGGCGTGGCCGGTGCCGCCGCGCTGGCGGGTGCCGCCTGGTGGTTCGGGTGGATTCCGCCGTCCTCCCGCATGGCGGAGC CTCCACCGGCCACCCGGGCGCCCGAGCCCCCCGTGGCCGAGGCGCCGGCATCCGTGCCGGAGCCCGTGGCCTCCGGGCCG CAGCACCCCGTGGACTCCGCGCAGGCGCCGCCGCCGCCCGCGCCGAAGGACTCCGACGCCTTCATCGCACAGGCGCTGGG CGAATGGCTGGGGAGCGATCGCATCGCCGCCCTGCTGCATCTGGACGACATCGTGCGGCGCATCGTGGTCACCGTGGACA ACCTGCCCCGGACCCAGGCGCCGTCGCGCCTGTGGCCCGTGCAGCCCGCGCCGCAGCACCTGGCGGTGCAGGCGGAGCCC GGCAGTGCGGTGGACGAGAACGGCGCGCCGCTGCACGCCACCATCGCTGCGGCCAATGCCGCGCGCTACCAGGCCCTGGT CGCCCTCGTGGAAGCGGTACCGCGCGACCGCGCGGTGGCCCTCTACCGGCAGCTCTACCCGTTGTTCCAGCAGACCTATG TGGACCTGGGCTATCCCAAGGGCTACTTCAACGACCGGCTCGTGGCCGTGCTGGGTCACCTGCAGGAAACGCCCGAGCCG CGCGGGCCCCTGCGCCTGCAGCTCACCCGCGTGCAGGGCGACGTGCCGTCCACCCGGCCCTGGGTGCGCTACGAATTCGC CGATCCGCACCTGCAGGCGCTGTCCAGTGGCCAGAAGATGATGCTGCGCATCGGGCCGGAGAACGCACGCCGGGTCAAGG CCGTGCTGGCCGACCTGCGCCGCCGGCTGGTCTCGGCCAATGCGCCTGCCCAGGCCGCCGCCGTGCCTGCTCCGTCGGTG GCCGCGAGCGCCGCACCCTGA
Upstream 100 bases:
>100_bases TCGCGGCGCGGCTCCACAATGGGCGGTGGCGGGGCTGCTTTCGCAGGCCCTGCATTCCGCCGCGGCGCGCGCCGCGTTTC CGTTCGCGAAAGACATCCGC
Downstream 100 bases:
>100_bases TCAACCCACGACGCCCGCCATGCCTCTTTTCATCGCCATGAACCGTTTCCGCATCGTCCCCGGCCGCGAGGACGAATTCG TCGAGATCTGGCGCCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MPDSDPQDFRPPSSLPRRASPVGWVLAGVAGAAALAGAAWWFGWIPPSSRMAEPPPATRAPEPPVAEAPASVPEPVASGP QHPVDSAQAPPPPAPKDSDAFIAQALGEWLGSDRIAALLHLDDIVRRIVVTVDNLPRTQAPSRLWPVQPAPQHLAVQAEP GSAVDENGAPLHATIAAANAARYQALVALVEAVPRDRAVALYRQLYPLFQQTYVDLGYPKGYFNDRLVAVLGHLQETPEP RGPLRLQLTRVQGDVPSTRPWVRYEFADPHLQALSSGQKMMLRIGPENARRVKAVLADLRRRLVSANAPAQAAAVPAPSV AASAAP
Sequences:
>Translated_326_residues MPDSDPQDFRPPSSLPRRASPVGWVLAGVAGAAALAGAAWWFGWIPPSSRMAEPPPATRAPEPPVAEAPASVPEPVASGP QHPVDSAQAPPPPAPKDSDAFIAQALGEWLGSDRIAALLHLDDIVRRIVVTVDNLPRTQAPSRLWPVQPAPQHLAVQAEP GSAVDENGAPLHATIAAANAARYQALVALVEAVPRDRAVALYRQLYPLFQQTYVDLGYPKGYFNDRLVAVLGHLQETPEP RGPLRLQLTRVQGDVPSTRPWVRYEFADPHLQALSSGQKMMLRIGPENARRVKAVLADLRRRLVSANAPAQAAAVPAPSV AASAAP >Mature_325_residues PDSDPQDFRPPSSLPRRASPVGWVLAGVAGAAALAGAAWWFGWIPPSSRMAEPPPATRAPEPPVAEAPASVPEPVASGPQ HPVDSAQAPPPPAPKDSDAFIAQALGEWLGSDRIAALLHLDDIVRRIVVTVDNLPRTQAPSRLWPVQPAPQHLAVQAEPG SAVDENGAPLHATIAAANAARYQALVALVEAVPRDRAVALYRQLYPLFQQTYVDLGYPKGYFNDRLVAVLGHLQETPEPR GPLRLQLTRVQGDVPSTRPWVRYEFADPHLQALSSGQKMMLRIGPENARRVKAVLADLRRRLVSANAPAQAAAVPAPSVA ASAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34753; Mature: 34622
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDSDPQDFRPPSSLPRRASPVGWVLAGVAGAAALAGAAWWFGWIPPSSRMAEPPPATRA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PEPPVAEAPASVPEPVASGPQHPVDSAQAPPPPAPKDSDAFIAQALGEWLGSDRIAALLH CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH LDDIVRRIVVTVDNLPRTQAPSRLWPVQPAPQHLAVQAEPGSAVDENGAPLHATIAAANA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHH ARYQALVALVEAVPRDRAVALYRQLYPLFQQTYVDLGYPKGYFNDRLVAVLGHLQETPEP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC RGPLRLQLTRVQGDVPSTRPWVRYEFADPHLQALSSGQKMMLRIGPENARRVKAVLADLR CCCEEEEEEEECCCCCCCCCEEEEECCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH RRLVSANAPAQAAAVPAPSVAASAAP HHHHCCCCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure PDSDPQDFRPPSSLPRRASPVGWVLAGVAGAAALAGAAWWFGWIPPSSRMAEPPPATRA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PEPPVAEAPASVPEPVASGPQHPVDSAQAPPPPAPKDSDAFIAQALGEWLGSDRIAALLH CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH LDDIVRRIVVTVDNLPRTQAPSRLWPVQPAPQHLAVQAEPGSAVDENGAPLHATIAAANA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHH ARYQALVALVEAVPRDRAVALYRQLYPLFQQTYVDLGYPKGYFNDRLVAVLGHLQETPEP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC RGPLRLQLTRVQGDVPSTRPWVRYEFADPHLQALSSGQKMMLRIGPENARRVKAVLADLR CCCEEEEEEEECCCCCCCCCEEEEECCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH RRLVSANAPAQAAAVPAPSVAASAAP HHHHCCCCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA