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The map label for this gene is omp32 [H]

Identifier: 120610945

GI number: 120610945

Start: 2501093

End: 2502160

Strand: Reverse

Name: omp32 [H]

Synonym: Aave_2271

Alternate gene names: 120610945

Gene position: 2502160-2501093 (Counterclockwise)

Preceding gene: 120610947

Following gene: 120610943

Centisome position: 46.75

GC content: 67.88

Gene sequence:

>1068_bases
GTGAATACGCATTCCAGAACAACCCTGGCGGCCGCGGCCGCGCTGCTGGCTGCGGCCGGTACATTGCCCGGCGCCGCGCA
CGCGCAGTCCGCCGTCACGCTCTACGGCCGCGTGGTCGCCGGCGTGGAATACATCGACAAGATCGCCGACCCCGCCACCG
GCCAGGCCCATTCGCTCACGCGCGCCGCCGACAACCAGTGGGGAACGAGCATGATCGGCTTGCGCGGCAAGGAAGACCTG
GGCGGCGGCCTGAGCGCCGTCTTCAACCTGGAAGGCGGCTTCAGCGCCACCAAGGGCACGACCGGCACCGCGTTCTTCAA
TCGCCGTTCGCTGGTGGGCCTGAGCAGCGCGAGCTGGGGTACCTTGATGGTGGGCAAGAACCTCTTCAACAGCAACGACG
TCTGGAACATCGATCCCACGGGCCAGCAGTTCATGAGCAGCGCGACGCTGGTGCGCGGGCGCAACTGGCCGGGCGTGAAC
AACCTCATCGAATACACCACGCCCAACTTCGGCGGCTTCACCGCCAACGTGCAGGTGGGCCTGGGCGAGCAGACGGGCTC
GAACAAGCAGTTGCGCAACGAAGGCCTGTCGCTGGCCTACGCCGCGAACGACCTGGAAGTGCGCGCCATGTTCAACAGCC
GGCGTGATGCCAACGGCAACTACAGCGACGCCTACAACTATTCCAGGGACGCGATCCTGGGCGGTACCTACCGCATCGGC
GCGGCCAAGCTGTTCGCCGCCTACGAAGCCATCTCCGCCCCCGACGCCGTGGCCGGCGCGCCCAGCAAGCTCAAGCACGG
CTGGCTGGGCGTGCGCTACGACGTGACGCCCGCGCTGACCCTGATCGGCGCGGGCTACCGCGTCAGCGCCAACCGGGGCA
ACGGCAATGCGACGCTGCTGATGGTGGGCGCGGACTACTACCTGTCCAAGCGCACCTTCCTGTACGCGTCGCTGGGCGGC
GTGAACAACAGCTCCACCGCCAACTACGCGGCCGACGTCACCGTCAACGGCCCGGGCGCCGGCGCATCGCAGCGCGCCGT
GTACTTCGGCATGGGCCACTCGTTCTGA

Upstream 100 bases:

>100_bases
CCAAGGCCTCCGGCGCGGATGCGCGCCACGGGCGGGTGACTGCCGGGCGCAGCCCGGTTTTCTTTCGATCGGCAAAGTTA
CTACAACGGAGATAAATGCT

Downstream 100 bases:

>100_bases
GGGGGCCTGTCCCGGTTTTCTGTTTCTTCATTGCGAGCCGGTGGACCGGCATTGGGGTTGCCATGCGGGGCGTGGCAGCC
CTTTTTTGCCTGGCGCACGC

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNTHSRTTLAAAAALLAAAGTLPGAAHAQSAVTLYGRVVAGVEYIDKIADPATGQAHSLTRAADNQWGTSMIGLRGKEDL
GGGLSAVFNLEGGFSATKGTTGTAFFNRRSLVGLSSASWGTLMVGKNLFNSNDVWNIDPTGQQFMSSATLVRGRNWPGVN
NLIEYTTPNFGGFTANVQVGLGEQTGSNKQLRNEGLSLAYAANDLEVRAMFNSRRDANGNYSDAYNYSRDAILGGTYRIG
AAKLFAAYEAISAPDAVAGAPSKLKHGWLGVRYDVTPALTLIGAGYRVSANRGNGNATLLMVGADYYLSKRTFLYASLGG
VNNSSTANYAADVTVNGPGAGASQRAVYFGMGHSF

Sequences:

>Translated_355_residues
MNTHSRTTLAAAAALLAAAGTLPGAAHAQSAVTLYGRVVAGVEYIDKIADPATGQAHSLTRAADNQWGTSMIGLRGKEDL
GGGLSAVFNLEGGFSATKGTTGTAFFNRRSLVGLSSASWGTLMVGKNLFNSNDVWNIDPTGQQFMSSATLVRGRNWPGVN
NLIEYTTPNFGGFTANVQVGLGEQTGSNKQLRNEGLSLAYAANDLEVRAMFNSRRDANGNYSDAYNYSRDAILGGTYRIG
AAKLFAAYEAISAPDAVAGAPSKLKHGWLGVRYDVTPALTLIGAGYRVSANRGNGNATLLMVGADYYLSKRTFLYASLGG
VNNSSTANYAADVTVNGPGAGASQRAVYFGMGHSF
>Mature_355_residues
MNTHSRTTLAAAAALLAAAGTLPGAAHAQSAVTLYGRVVAGVEYIDKIADPATGQAHSLTRAADNQWGTSMIGLRGKEDL
GGGLSAVFNLEGGFSATKGTTGTAFFNRRSLVGLSSASWGTLMVGKNLFNSNDVWNIDPTGQQFMSSATLVRGRNWPGVN
NLIEYTTPNFGGFTANVQVGLGEQTGSNKQLRNEGLSLAYAANDLEVRAMFNSRRDANGNYSDAYNYSRDAILGGTYRIG
AAKLFAAYEAISAPDAVAGAPSKLKHGWLGVRYDVTPALTLIGAGYRVSANRGNGNATLLMVGADYYLSKRTFLYASLGG
VNNSSTANYAADVTVNGPGAGASQRAVYFGMGHSF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37072; Mature: 37072

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTHSRTTLAAAAALLAAAGTLPGAAHAQSAVTLYGRVVAGVEYIDKIADPATGQAHSLT
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RAADNQWGTSMIGLRGKEDLGGGLSAVFNLEGGFSATKGTTGTAFFNRRSLVGLSSASWG
HHHCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCEEEEECCCCCC
TLMVGKNLFNSNDVWNIDPTGQQFMSSATLVRGRNWPGVNNLIEYTTPNFGGFTANVQVG
EEEEECCCCCCCCEEECCCCHHHHHHHHHEEECCCCCCCCCCEEECCCCCCCEEEEEEEE
LGEQTGSNKQLRNEGLSLAYAANDLEVRAMFNSRRDANGNYSDAYNYSRDAILGGTYRIG
CCCCCCCCHHHHHCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCEEEHH
AAKLFAAYEAISAPDAVAGAPSKLKHGWLGVRYDVTPALTLIGAGYRVSANRGNGNATLL
HHHHHHHHHHHCCCCHHCCCCHHHCCCEEEEEEECCCEEEEEECCEEEEECCCCCCEEEE
MVGADYYLSKRTFLYASLGGVNNSSTANYAADVTVNGPGAGASQRAVYFGMGHSF
EEECCEEECCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MNTHSRTTLAAAAALLAAAGTLPGAAHAQSAVTLYGRVVAGVEYIDKIADPATGQAHSLT
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RAADNQWGTSMIGLRGKEDLGGGLSAVFNLEGGFSATKGTTGTAFFNRRSLVGLSSASWG
HHHCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCEEEEECCCCCC
TLMVGKNLFNSNDVWNIDPTGQQFMSSATLVRGRNWPGVNNLIEYTTPNFGGFTANVQVG
EEEEECCCCCCCCEEECCCCHHHHHHHHHEEECCCCCCCCCCEEECCCCCCCEEEEEEEE
LGEQTGSNKQLRNEGLSLAYAANDLEVRAMFNSRRDANGNYSDAYNYSRDAILGGTYRIG
CCCCCCCCHHHHHCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCEEEHH
AAKLFAAYEAISAPDAVAGAPSKLKHGWLGVRYDVTPALTLIGAGYRVSANRGNGNATLL
HHHHHHHHHHHCCCCHHCCCCHHHCCCEEEEEEECCCEEEEEECCEEEEECCCCCCEEEE
MVGADYYLSKRTFLYASLGGVNNSSTANYAADVTVNGPGAGASQRAVYFGMGHSF
EEECCEEECCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]