| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610942
Identifier: 120610942
GI number: 120610942
Start: 2499356
End: 2499634
Strand: Reverse
Name: 120610942
Synonym: Aave_2268
Alternate gene names: NA
Gene position: 2499634-2499356 (Counterclockwise)
Preceding gene: 120610943
Following gene: 120610941
Centisome position: 46.7
GC content: 79.57
Gene sequence:
>279_bases GTGACCGCGCCGCACGGCCCGCAGGCGCTCCCGGCGGGCCTCCCGCCCCTGCGCACCGCAGGCGACGCGGCGCAGGCTTT CGCCAGCCTGCAGGCGCTGGCGCAGTCCCGTGGCGTCGCGCTGCGGCCGCCGCCCGAGCCACCCACCACCTGCTGCGGCC GCGGCTGCAACGGCTGCGTCTGGGAAGGCTTCTACGCCGCCGCGCACTGGTGGTGCGAAGACGCGCAGGAGGCGCTGGCG TCCCCTCCGCCGGGCAGGCCCGCGGCCCCTGCCGCCTGA
Upstream 100 bases:
>100_bases ACCTCATGGGGCAGATCCACGTGGTCGGCTGGTTCTCGCTCGTGCTCGGGCTGGCCTTCATGGGCCGCTGGGCCTGGCAG CGCTGGCGCGGCGGCCCCCG
Downstream 100 bases:
>100_bases GCGACCCACGCCGGCAGCCGGCGCGGCAGTTATTTCGTGGCCCCGGGCACTCTACGGTATTGCTGTCGCGTTATTCTCTG CCCATGCATGCCACTGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MTAPHGPQALPAGLPPLRTAGDAAQAFASLQALAQSRGVALRPPPEPPTTCCGRGCNGCVWEGFYAAAHWWCEDAQEALA SPPPGRPAAPAA
Sequences:
>Translated_92_residues MTAPHGPQALPAGLPPLRTAGDAAQAFASLQALAQSRGVALRPPPEPPTTCCGRGCNGCVWEGFYAAAHWWCEDAQEALA SPPPGRPAAPAA >Mature_91_residues TAPHGPQALPAGLPPLRTAGDAAQAFASLQALAQSRGVALRPPPEPPTTCCGRGCNGCVWEGFYAAAHWWCEDAQEALAS PPPGRPAAPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9357; Mature: 9225
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPHGPQALPAGLPPLRTAGDAAQAFASLQALAQSRGVALRPPPEPPTTCCGRGCNGCV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCC WEGFYAAAHWWCEDAQEALASPPPGRPAAPAA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TAPHGPQALPAGLPPLRTAGDAAQAFASLQALAQSRGVALRPPPEPPTTCCGRGCNGCV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCC WEGFYAAAHWWCEDAQEALASPPPGRPAAPAA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA