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The map label for this gene is cyoC [H]

Identifier: 120610895

GI number: 120610895

Start: 2441293

End: 2441925

Strand: Reverse

Name: cyoC [H]

Synonym: Aave_2221

Alternate gene names: 120610895

Gene position: 2441925-2441293 (Counterclockwise)

Preceding gene: 120610896

Following gene: 120610894

Centisome position: 45.62

GC content: 64.77

Gene sequence:

>633_bases
ATGTCTGATATCCGATACCAAGCCGGCGCCGCAGGCGCCCTGGCTTCCCGCGACTACCACCTCGCGGAGGAGCCCCATCC
AGAGAACGGCACCGCCCTGGGCTTCTGGCTCTACCTGATGAGCGACTGCCTCATCTTCGCCGCGCTGTTCGCCACCTACG
GCGTGCTGGGCCGCAGCTACGCCGCCGGCCCGACCGGCGCGCAGCTCTTCGATCTCACGCTGGTGGCCATCAACACGGCC
TTCCTGCTGCTGTCGTCCATCACCTTCGGCTTCGCCATGCTGCAGAAGCAGAAGGGCAACGTGCGCGGCACGCTGGGCTG
GCTGGCGATCACGGGCCTGTTCGGCCTGTGCTTCCTGGGCCTGGAGCTCTACGAGTTCCACCACCTGATCCATCAGGGCG
CGGGCCCGCAGCGCAGCGCCTTCCTGTCGGCCTTCTTCACGCTGGTGGGCACCCACGGGCTGCACGTCACCTTCGGCCTG
ATCTGGCTGGTGGTGCTGATGATCCAGATCGGAAAACATGGCCTGATCCACGAGAACAAGCGCCGCCTGATGTGCCTGTC
GATGTTCTGGCACTTCCTGGACGTGGTCTGGATCGGCGTCTTCACCTTTGTGTACCTGATGGGGGTGCTGTAA

Upstream 100 bases:

>100_bases
GCCGCGATCATCCACACGTTCAACTACAAGCGCGACTTCTACATCCCCGCCGATGAAGTCGGCACGACCGAAGAAGCCCG
CACTCTCCAACTCGCCCGCC

Downstream 100 bases:

>100_bases
ACATGAGCGCACAGAATTCGCACGCACACGCACACGCCCACGCAGGGCATGACGACCACCACCACGACGACGGCCCGCAC
AGCACCTTCTCGGGCTACAT

Product: cytochrome c oxidase subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III [H]

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSDIRYQAGAAGALASRDYHLAEEPHPENGTALGFWLYLMSDCLIFAALFATYGVLGRSYAAGPTGAQLFDLTLVAINTA
FLLLSSITFGFAMLQKQKGNVRGTLGWLAITGLFGLCFLGLELYEFHHLIHQGAGPQRSAFLSAFFTLVGTHGLHVTFGL
IWLVVLMIQIGKHGLIHENKRRLMCLSMFWHFLDVVWIGVFTFVYLMGVL

Sequences:

>Translated_210_residues
MSDIRYQAGAAGALASRDYHLAEEPHPENGTALGFWLYLMSDCLIFAALFATYGVLGRSYAAGPTGAQLFDLTLVAINTA
FLLLSSITFGFAMLQKQKGNVRGTLGWLAITGLFGLCFLGLELYEFHHLIHQGAGPQRSAFLSAFFTLVGTHGLHVTFGL
IWLVVLMIQIGKHGLIHENKRRLMCLSMFWHFLDVVWIGVFTFVYLMGVL
>Mature_209_residues
SDIRYQAGAAGALASRDYHLAEEPHPENGTALGFWLYLMSDCLIFAALFATYGVLGRSYAAGPTGAQLFDLTLVAINTAF
LLLSSITFGFAMLQKQKGNVRGTLGWLAITGLFGLCFLGLELYEFHHLIHQGAGPQRSAFLSAFFTLVGTHGLHVTFGLI
WLVVLMIQIGKHGLIHENKRRLMCLSMFWHFLDVVWIGVFTFVYLMGVL

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=203, Percent_Identity=56.6502463054187, Blast_Score=228, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 23221; Mature: 23089

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIRYQAGAAGALASRDYHLAEEPHPENGTALGFWLYLMSDCLIFAALFATYGVLGRSY
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AAGPTGAQLFDLTLVAINTAFLLLSSITFGFAMLQKQKGNVRGTLGWLAITGLFGLCFLG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LELYEFHHLIHQGAGPQRSAFLSAFFTLVGTHGLHVTFGLIWLVVLMIQIGKHGLIHENK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH
RRLMCLSMFWHFLDVVWIGVFTFVYLMGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDIRYQAGAAGALASRDYHLAEEPHPENGTALGFWLYLMSDCLIFAALFATYGVLGRSY
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AAGPTGAQLFDLTLVAINTAFLLLSSITFGFAMLQKQKGNVRGTLGWLAITGLFGLCFLG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LELYEFHHLIHQGAGPQRSAFLSAFFTLVGTHGLHVTFGLIWLVVLMIQIGKHGLIHENK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH
RRLMCLSMFWHFLDVVWIGVFTFVYLMGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]