| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610823
Identifier: 120610823
GI number: 120610823
Start: 2359656
End: 2360126
Strand: Direct
Name: 120610823
Synonym: Aave_2148
Alternate gene names: NA
Gene position: 2359656-2360126 (Clockwise)
Preceding gene: 120610815
Following gene: 120610825
Centisome position: 44.08
GC content: 60.51
Gene sequence:
>471_bases ATGTTCAACAGAATTACAGGAGGCGGATGGAATCCGTACCCGACCTTCAATGTGTCCCCGAACAGTTCGCCCGAGCGTGC CCAGCAGGAATCCCACGACAAGGTCGCCAGTTGGGACTTTTCCGCCAGTCCGCCGCGCGCTGCGAACCGCCCACCCAGGG CCGCGGCGGAATCGTCTTCTTCCATGGCGCCCAGGGGGCTGACCTTTTCCCCGAGCACGAAGTACGAAGGCCGAGGCCCC CTCGACGAACGGCACGTCTCGGGTGGCGGTGGCGATCCCAAGATGAGAAAGCAGCTCTGGCGCAACTCGAAAGCGGGTGG CTTGCTGCACAGCTATCCGCATGGGCTGCCCGACAATCTCAAAAAAGAAATCAAGGACGGCACGGCACTGAATGCGACCC CCCACGAGGGCAAGGCCGTCTATGAGCTCTACAAGAAGATGGTGAAAGAGAAGACCAAGGGACTGATGTAG
Upstream 100 bases:
>100_bases CTGCCGCCGGGCTTCGCATCCAAGAACAATCGCGGCAGTGTTGCCCGGTGGCATCGTCCAGCGGCGCAGCGAAATTTCAC CTCGATTTTCAGGAATACCC
Downstream 100 bases:
>100_bases CCTCTGCTCGGCAGTCGCCCCCTGTCAGCCCAGCAGCTCGAAGGCATCGAGCATGCGCTGGGCGACTTCCGCCAGCTTCA GGCCCTTGTCCATCGCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MFNRITGGGWNPYPTFNVSPNSSPERAQQESHDKVASWDFSASPPRAANRPPRAAAESSSSMAPRGLTFSPSTKYEGRGP LDERHVSGGGGDPKMRKQLWRNSKAGGLLHSYPHGLPDNLKKEIKDGTALNATPHEGKAVYELYKKMVKEKTKGLM
Sequences:
>Translated_156_residues MFNRITGGGWNPYPTFNVSPNSSPERAQQESHDKVASWDFSASPPRAANRPPRAAAESSSSMAPRGLTFSPSTKYEGRGP LDERHVSGGGGDPKMRKQLWRNSKAGGLLHSYPHGLPDNLKKEIKDGTALNATPHEGKAVYELYKKMVKEKTKGLM >Mature_156_residues MFNRITGGGWNPYPTFNVSPNSSPERAQQESHDKVASWDFSASPPRAANRPPRAAAESSSSMAPRGLTFSPSTKYEGRGP LDERHVSGGGGDPKMRKQLWRNSKAGGLLHSYPHGLPDNLKKEIKDGTALNATPHEGKAVYELYKKMVKEKTKGLM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17077; Mature: 17077
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNRITGGGWNPYPTFNVSPNSSPERAQQESHDKVASWDFSASPPRAANRPPRAAAESSS CCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCC SMAPRGLTFSPSTKYEGRGPLDERHVSGGGGDPKMRKQLWRNSKAGGLLHSYPHGLPDNL CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCHHHCCCCCCHHH KKEIKDGTALNATPHEGKAVYELYKKMVKEKTKGLM HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFNRITGGGWNPYPTFNVSPNSSPERAQQESHDKVASWDFSASPPRAANRPPRAAAESSS CCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCC SMAPRGLTFSPSTKYEGRGPLDERHVSGGGGDPKMRKQLWRNSKAGGLLHSYPHGLPDNL CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCHHHCCCCCCHHH KKEIKDGTALNATPHEGKAVYELYKKMVKEKTKGLM HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA