| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610421
Identifier: 120610421
GI number: 120610421
Start: 1900845
End: 1901492
Strand: Reverse
Name: 120610421
Synonym: Aave_1738
Alternate gene names: NA
Gene position: 1901492-1900845 (Counterclockwise)
Preceding gene: 120610422
Following gene: 120610420
Centisome position: 35.52
GC content: 70.52
Gene sequence:
>648_bases GTGAAGGAGCGCCCCATCCTCTTCAGCGCGCCCATGGTGCGCGCCCTGCTCGCGGGGTCGAAGACCCAGACGCGACGGCC CCTCAAGCCCCAGCCAGCACCGAACCATCCTCATGACGGCGGCACGAAATGGGTGCTGAAAGACGGGCTGCATGTGCCCG TCGGCAGCGTCGGGCACCTCTCCGTGCGCGAGAAGCAGGGGCTGCGCTGCCCCTACGGCCAGCCGGGCGACCGGCTCTGG GTGCGCGAGGCCTGGCGCACTGTTGCCGAGGCCGATGCACTTCCGCCTCGCGACCTGAACGAAGCGCACCGCATCTGGAA TGAGGCCGATGCGCCGCATCAGCCGGGCGCGGGCAAGCTACGCCCGGGCATGTTCATGCCCCGCTGGGCCAGCCGCATCA CGCTGGAGATCACGGCCGTGCGCGTCGAGCGCCTGCAGGACATCAGCCGCGAGGACGCCATGGCCGAGGGCATCGTCATC CAGCCCGATGGCGGCTACGGCCTCGCCGACACCACCCACTACCACGCCACCGACCCGCGGCAGAGCTATTTCTCGCTGTG GGAAGCCATCAACGGCCCGGGCAGCGTCGAGGCCAACCCCTGGGTGTGGGCCGTGACGTTCCCCGCGGTGGGCCCAGGCC ATGGGTAG
Upstream 100 bases:
>100_bases GGACCAAGCTCAAGGCTGATGCCCTGGTCATCGGGAAGTACGCCAAGCCCACGCCCATGGCGCCGTCCCGCGCGCGGGCA ATCTACCTGGAGCCCCAGCC
Downstream 100 bases:
>100_bases GCGCCGCCGCTTCCGCTGGACCCGGAAGACCTACCGGGAGGCCCACCGCGCCGCCCGGGTCTTCGACGGCTACGGCTTCA TGTACCACGACGAGCCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKERPILFSAPMVRALLAGSKTQTRRPLKPQPAPNHPHDGGTKWVLKDGLHVPVGSVGHLSVREKQGLRCPYGQPGDRLW VREAWRTVAEADALPPRDLNEAHRIWNEADAPHQPGAGKLRPGMFMPRWASRITLEITAVRVERLQDISREDAMAEGIVI QPDGGYGLADTTHYHATDPRQSYFSLWEAINGPGSVEANPWVWAVTFPAVGPGHG
Sequences:
>Translated_215_residues MKERPILFSAPMVRALLAGSKTQTRRPLKPQPAPNHPHDGGTKWVLKDGLHVPVGSVGHLSVREKQGLRCPYGQPGDRLW VREAWRTVAEADALPPRDLNEAHRIWNEADAPHQPGAGKLRPGMFMPRWASRITLEITAVRVERLQDISREDAMAEGIVI QPDGGYGLADTTHYHATDPRQSYFSLWEAINGPGSVEANPWVWAVTFPAVGPGHG >Mature_215_residues MKERPILFSAPMVRALLAGSKTQTRRPLKPQPAPNHPHDGGTKWVLKDGLHVPVGSVGHLSVREKQGLRCPYGQPGDRLW VREAWRTVAEADALPPRDLNEAHRIWNEADAPHQPGAGKLRPGMFMPRWASRITLEITAVRVERLQDISREDAMAEGIVI QPDGGYGLADTTHYHATDPRQSYFSLWEAINGPGSVEANPWVWAVTFPAVGPGHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23758; Mature: 23758
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKERPILFSAPMVRALLAGSKTQTRRPLKPQPAPNHPHDGGTKWVLKDGLHVPVGSVGHL CCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCE SVREKQGLRCPYGQPGDRLWVREAWRTVAEADALPPRDLNEAHRIWNEADAPHQPGAGKL EEHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCC RPGMFMPRWASRITLEITAVRVERLQDISREDAMAEGIVIQPDGGYGLADTTHYHATDPR CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEECCCCHH QSYFSLWEAINGPGSVEANPWVWAVTFPAVGPGHG HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MKERPILFSAPMVRALLAGSKTQTRRPLKPQPAPNHPHDGGTKWVLKDGLHVPVGSVGHL CCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCE SVREKQGLRCPYGQPGDRLWVREAWRTVAEADALPPRDLNEAHRIWNEADAPHQPGAGKL EEHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCC RPGMFMPRWASRITLEITAVRVERLQDISREDAMAEGIVIQPDGGYGLADTTHYHATDPR CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEECCCCHH QSYFSLWEAINGPGSVEANPWVWAVTFPAVGPGHG HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA